Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g01632 ATGGCCACATATGCCACCACCACCTTGTTCCTTCTCCTTGCCATGGCCGCCACCACTACCACCACCCTTTGCCTCCGAGAAAAGGGTGTCCTCCAAATGGCCCAAAATCATGTTTCTCAAGCCAAGAATTGGGTTGCAAACTCTTTGAGATTGAATGGGTTTGGAAGCCAAAGCCTGAGCCTTTCTGACCAAACAAGTGCTGTACATGTAGCCCTTAGAGACTGTGCCAAGCTCTATGAGGAGAGTGAGTTTAGGCTCTCTCACATGATGTCTCAAAACAGCAGATACACCAAAGAAGATGCACTCACATGGATAAGTGCTGTGATGACAAATCACAGGACTTGTTTGGATGGTTTGCAAGAAAAAGGGTATGTCCAAGCTCAGGTTCTGGATAGAAACTTGACCATGTCGCTTAAGCAAGCTCTTGTTTTGTATTCAAGGAATAAAGACATAGCCAAAGGACCACAGGGAACAATATCAGAATCAAGCTCTGGTATTCTAGAATCATGGAGTGAAACAAGCTATAAACCAGACTTCACAGTGGCAGAGGATGGTTCAGGGAGCCACAGAACAATACAAGCAGCAGTGAATGCACTTGCTGCAATGGGACACAACCGTCCTGCAAGAGCAATCATACATGTAAAATCTGGGGTCTATAATGAGAAGGTGCAAATTGGAGAGAAACTGCATGATGTGATGCTTGTAGGAGATGGCATAGACAAAACTATTGTTACTGGCAACAGAAATGTTGTTCAAGGTTCTTCCACTATGGGCTCAGCCACATTTGATGTATCAGGGGATGGATTTTGGGCGAGAGACATGACATTTGAGAACACTGCAGGGCCAGAAAAACACCAAGCAGTGGCAATCAAGGTTAGTTCAGACTTATCAGTCTTCTATAGGTGTAGCTTCAGAGGCTACCAAGACACTCTTTACGTGCACTCAAATCGCCAATTCTACCGTGACTGTCACATATATGGCACCATAGATTTCATATTCGGGGATGCCACAGTGGTGCTACAGAACTGTGACATCTTAGTGAGGAAGCCAATGAGCCACCAATCGAACTTCATCACAGCACAAGGAAGAGATGACCCGTACAAGAACACTGGGATTGCCATCCATGGTTGCAGGGTTAGAGCAGCATCAGAGTTTGTGACCCTAAAGGATTCTTACGAGACATTCCTTGGAAGGCCTTGGAAGAAGTACTCAAGGACTGTGTACCTGAAGAGTGACTTGGATGGGCTGATTCAGCCAAGAGGGTGGGGTGAATGGAGTGGAAACTTTGCACTCTCAACTTTGTTCTATGGAGAGTATATGAACACCGGAAATGGTGCCTCTACACAAAATAGGGTAAGTTGGCCTGGTTTTCATGTTCTGAGGAGTGCCACTGAGGCCTCACCCTTCACAGTGAGCCAATTTCTGCAAGGAGAAAGGTGGATTCCTGCTACAGGGGTGCCATTCTCTTCTGGAATATGA 1479 0.4598 MATYATTTLFLLLAMAATTTTTLCLREKGVLQMAQNHVSQAKNWVANSLRLNGFGSQSLSLSDQTSAVHVALRDCAKLYEESEFRLSHMMSQNSRYTKEDALTWISAVMTNHRTCLDGLQEKGYVQAQVLDRNLTMSLKQALVLYSRNKDIAKGPQGTISESSSGILESWSETSYKPDFTVAEDGSGSHRTIQAAVNALAAMGHNRPARAIIHVKSGVYNEKVQIGEKLHDVMLVGDGIDKTIVTGNRNVVQGSSTMGSATFDVSGDGFWARDMTFENTAGPEKHQAVAIKVSSDLSVFYRCSFRGYQDTLYVHSNRQFYRDCHIYGTIDFIFGDATVVLQNCDILVRKPMSHQSNFITAQGRDDPYKNTGIAIHGCRVRAASEFVTLKDSYETFLGRPWKKYSRTVYLKSDLDGLIQPRGWGEWSGNFALSTLFYGEYMNTGNGASTQNRVSWPGFHVLRSATEASPFTVSQFLQGERWIPATGVPFSSGI 492
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g01632 492 ProSitePatterns Pectinesterase signature 2. 325 334 IPR033131 -
Spst4g01632 492 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 58 136 IPR035513 -
Spst4g01632 492 PANTHER PECTINESTERASE 16 482 - -
Spst4g01632 492 FunFam Pectinesterase 172 492 - -
Spst4g01632 492 Pfam Plant invertase/pectin methylesterase inhibitor 31 129 IPR006501 GO:0004857
Spst4g01632 492 Gene3D - 172 492 IPR012334 -
Spst4g01632 492 Gene3D Invertase/pectin methylesterase inhibitor family protein 18 147 IPR035513 -
Spst4g01632 492 SMART PMEI_2 6 144 IPR006501 GO:0004857
Spst4g01632 492 SUPERFAMILY Pectin lyase-like 175 491 IPR011050 -
Spst4g01632 492 Pfam Pectinesterase 178 478 IPR000070 GO:0030599|GO:0042545
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g01632 Spst-Chr4 56003787 56007071 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst4g01632 8 492 Carbohydrate Esterase AT3G60730 54.231 0.0 569
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g01632 K01051 - gmx:100792852 803.127