Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g01628 ATGGCATCATCTTCATCTTCCTTTTCCTTGCTAATAACCCTTCTACTTGTTCCCTTTCTATTTTCCTCCATTGCTTTCTCTTACTCATTCAAGGATATTCAATCATGGTGCAACCAAACCCCTTATCCTCAACCTTGTGAGTACTACTTGACCAACCATGTCTTCAACAAACCCATCAAAAACAAATCCGATTTCCTCAAAGTTTCCCTTCAACTTGCACTAGATAGAGCACAAAAGGGCGAACTAAACACCCACTCTCTAGGACCAAAGTGTCGCAACGTCCATGAAAAATCTGCATGGACTGATTGCATTGAACTCTATGAATACACCATCCAAAGACTCAACAAAACTCTTGACTCCTACACCAAGTGCACCCAAACCGACATGCAAACATGGCTCAGCACAGCTCTCACAAACCTCGAAACATGCAAAACCGGGTTCTATGATCTTGGTGTCCCAGATTACATCCCACCCTTGTTGTCCAATAATGTCACAGAGTTACTAATCAACACCCTCTCTCTCAACAAGGGTTCCAATTACCAATTCAACCAACCTACTTACCAAGAGGGGGTCCCTACATGGGTGAAGCCTGGTGATAGAAAGTTGTTGCAGTCATCTTCTGCAGCTTCTAAAGCTAATGTGGTTGTCGCCAAAGATGGTTCTGGAAAGTACACAACAGTGAAAGCTGCTGTTGATGCTGCTCCAAAGAGTAGCAGTGGAAGGTATGTTATATATGTGAAAGGTGGAGTGTACAATGAACAAGTTGAAGTAAAATCAAATAATATAATGTTAGTTGGCGATGGTATCGGAAAAACCATAATCACAGGTAGCAAAAGCGTTGGAGGAGGATCTACAACCTTCCGTTCTGCCACTGTTGCTGCTGTGGGTGATGGATTTATTGCTCAAGACATCACATTCAGGAACACTGCAGGAGCTGCAAATCACCAAGCTGTGGCCTTCCGTTCTGGTTCAGATCTTTCAGTATTCTACAGATGCAGCTTTGAAGGTTACCAAGACACATTATATGTTCATTCAGAGAGACAATTTTATAGAGAATGTGACATCTATGGCACAGTGGATTTCATCTTTGGAAATGCTGCAGTGGTCTTGCAAAACTGCAACATCTATGCAAGAACTCCTCCTCAGAAAACCATCACAGTCACTGCTCAGGGTAGGACTGACCCTAACCAAAACACTGGAATCATCATCCACAACTCCAAGGTCACTGGTGCCTCAGGCTTCAACCCTAGTTCTGTGAAATCATACCTTGGCAGGCCGTGGCAGAAGTACTCAAGAACAGTGTTCATGAAGACCTTCCTTGACAGTTTGATCAACCCTGCTGGTTGGATGGAATGGGATGGTAACTTTGCTTTGGACACTTTGTATTATGCAGAATATGCCAACACTGGTCCTGGCTCCAACACTGCCAATAGGGTCACTTGGAAGGGTTACCATGTTCTCACAAGTGCTTCTCAGGCCACACCTTTCACTGTTGGTAACTTCATTGCTGGCAACTCTTGGATAACTAGCACTGGTGTCCCTTTCACCTCTGGTCTTTAA 1560 0.4391 MASSSSSFSLLITLLLVPFLFSSIAFSYSFKDIQSWCNQTPYPQPCEYYLTNHVFNKPIKNKSDFLKVSLQLALDRAQKGELNTHSLGPKCRNVHEKSAWTDCIELYEYTIQRLNKTLDSYTKCTQTDMQTWLSTALTNLETCKTGFYDLGVPDYIPPLLSNNVTELLINTLSLNKGSNYQFNQPTYQEGVPTWVKPGDRKLLQSSSAASKANVVVAKDGSGKYTTVKAAVDAAPKSSSGRYVIYVKGGVYNEQVEVKSNNIMLVGDGIGKTIITGSKSVGGGSTTFRSATVAAVGDGFIAQDITFRNTAGAANHQAVAFRSGSDLSVFYRCSFEGYQDTLYVHSERQFYRECDIYGTVDFIFGNAAVVLQNCNIYARTPPQKTITVTAQGRTDPNQNTGIIIHNSKVTGASGFNPSSVKSYLGRPWQKYSRTVFMKTFLDSLINPAGWMEWDGNFALDTLYYAEYANTGPGSNTANRVTWKGYHVLTSASQATPFTVGNFIAGNSWITSTGVPFTSGL 519
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g01628 519 Gene3D Invertase/pectin methylesterase inhibitor family protein 29 177 IPR035513 -
Spst4g01628 519 ProSitePatterns Pectinesterase signature 2. 355 364 IPR033131 -
Spst4g01628 519 Pfam Plant invertase/pectin methylesterase inhibitor 32 173 IPR006501 GO:0004857
Spst4g01628 519 FunFam Pectinesterase 207 519 - -
Spst4g01628 519 SMART PMEI_2 28 174 IPR006501 GO:0004857
Spst4g01628 519 Gene3D - 207 519 IPR012334 -
Spst4g01628 519 PANTHER PECTINESTERASE 19 509 - -
Spst4g01628 519 SUPERFAMILY Pectin lyase-like 207 518 IPR011050 -
Spst4g01628 519 NCBIfam pectinesterase inhibitor domain 6 176 IPR006501 GO:0004857
Spst4g01628 519 CDD PMEI-like_3 35 176 - -
Spst4g01628 519 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 31 175 IPR035513 -
Spst4g01628 519 Pfam Pectinesterase 213 505 IPR000070 GO:0030599|GO:0042545
Spst4g01628 519 ProSitePatterns Pectinesterase signature 1. 238 257 IPR018040 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g01628 Spst-Chr4 55948269 55951345 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst4g01628 11 519 Carbohydrate Esterase AT2G45220 65.625 0.0 704
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g01628 K01051 - gmx:100794948 935.25