Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g01626 ATGCAGTTCAGGCTAGGCAAGCGCGTCGCCCGGGTTGCCGCATGGGTCCTTCGTCGGGTCAGAATCCGATCCAGATACCACCGCCTCGGATCCTCTCCTTCGCGGAACTGTTATAATATTAATCCCATGACGAAGCTTCTCACGTGGGGGAGAAAGTTGAAGAGAGGAGCGAGGTCTCTTTGCAATAAATCCGGGTCAGGTTACCTCCCTATCGGGTCGGGTTCCGTTTGCGAGAGGACTCCGGCAGTGCCAAAAGGGCACTTGGCGGTTTACGTGGCGGAGGACGACGGTGAGTGTCGCCGTGTTTTGGTGCCCGTGATTTACTTCAACCACCCCCTGTTTAGCGATTTGTTACGGGAAACGGAGAAGGAATTCGGGTTCGAGCACCCCGGTGGGATTACGATTCCATGCCGACTCACCGAGTTTGAACGGGTCAAGACCCGGATCGCCTCCGGTTCGGGTTTACGCGGGAGGACCCGGAGATTGGGGTGGCGGCTACATTCTTGA 507 0.57 MQFRLGKRVARVAAWVLRRVRIRSRYHRLGSSPSRNCYNINPMTKLLTWGRKLKRGARSLCNKSGSGYLPIGSGSVCERTPAVPKGHLAVYVAEDDGECRRVLVPVIYFNHPLFSDLLRETEKEFGFEHPGGITIPCRLTEFERVKTRIASGSGLRGRTRRLGWRLHS 168
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g01626 168 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 62 144 IPR003676 GO:0009733
Spst4g01626 168 Pfam Auxin responsive protein 77 146 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g01626 Spst-Chr4 55898841 55899347 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst4g01626 78 142 Calmodulin-binding Proteins AT3G43120 47.692 3.88e-15 67.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g01626 K14488 - gmx:100808164 249.98
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst4g01626 4 55898841 55899347 Spst4g01626 4 55898841 55899347 ECH