Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g01620 ATGAAGAAAGTTCAAGAAGAAATTAGGACTTTGGGAGGTAAGAAAGAATTTCTAGAAGAAGATGACGTTCAAAAGTTTCCTTACTTCAAAGCTGTGATAAAAGAGACACTGAGACTGCATCTACCAGCACCATTGCTTGTGCCAAGAGAAACAAGTGAATCATGTACGATAGATGGTTATGAAATTCCAGCGAAGACAATAGTGTACGTGAATGCTTGGGCCATACATAGAGACCCTAAGGCTTGGAAAGACCCACATGAGTTTATACCGGAGAGGTTCTTAGATAGTACTATAGATTTTGGAGGGCAAGATTTTGAGTTCATTCCATTTGGTGCTGGTCGTAGAATTTGCCCTGGCATACCAATGACAATTGCTTCATTGGATCTTATTCTTGCTAATCTTCTGAATTCGTTTGATTGGGAGTTGCCAGCAGGAATGAAAAAAGAAGACATTGATACTGAAATGCTGCCAGGGTTTACTCAGCATAAGAAGAATCCACTGTCTGTTTTGGCCAAGCCTCCGATGAGGGATAAAACACCTACTTTCAAGTCGCCTAGGCTTCAGGCCTAG 570 0.4123 MKKVQEEIRTLGGKKEFLEEDDVQKFPYFKAVIKETLRLHLPAPLLVPRETSESCTIDGYEIPAKTIVYVNAWAIHRDPKAWKDPHEFIPERFLDSTIDFGGQDFEFIPFGAGRRICPGIPMTIASLDLILANLLNSFDWELPAGMKKEDIDTEMLPGFTQHKKNPLSVLAKPPMRDKTPTFKSPRLQA 189
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g01620 189 PANTHER CYTOCHROME P450 71B11-RELATED 1 171 - -
Spst4g01620 189 MobiDBLite consensus disorder prediction 167 189 - -
Spst4g01620 189 Pfam Cytochrome P450 1 165 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst4g01620 189 Coils Coil 1 21 - -
Spst4g01620 189 PRINTS E-class P450 group I signature 30 48 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst4g01620 189 PRINTS E-class P450 group I signature 117 140 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst4g01620 189 PRINTS E-class P450 group I signature 107 117 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst4g01620 189 PRINTS E-class P450 group I signature 71 95 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst4g01620 189 FunFam Predicted protein 1 169 - -
Spst4g01620 189 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 110 119 IPR017972 GO:0005506|GO:0016705
Spst4g01620 189 SUPERFAMILY Cytochrome P450 1 173 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst4g01620 189 Gene3D Cytochrome P450 1 179 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g01620 Spst-Chr4 55711272 55711962 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst4g01620 1 172 Cytochrome P450 AT3G26330 55.233 1.29e-61 197
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g01620 - - gmx:100801312 321.627