Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g01618 ATGTTGTCATCGTTTCTTCTAATTCCATGCCTAACTTTTCTTGTGTTTTTGCTGTTCTTCTTTCGATTCTGTACAACTTCCAAGAAACCATCATTTCCACCTGGTCCTAGAGGTCATCCAATAGTAGGAAATCTTTTTCAGCTAGATAGTTCAAACCTTCATGAGCAGCTATGGGAATTCTCAAAGAGATATGGTCCTTTATTTTCTCTTCAATTAGGTTTAAGGCAAGCAATAGTTATTTGCTCTCCTAAACTGGCCAAAGAGGTAATGAAAGACCATGACTCTGAGTGTTGTCGACGACCTAGATTACTTGGTCAGCAGAAACTGTCCTATAATGGGTTAGACTTAGCATTTTCCCAATATGCTGATTATTGGAGAGAAATCAGAAAAATTTGTGTTGTCCATGTCCTTAGCGCCAAACGTGTCTCATGCTTTTCCACAATAAGACATTTAGAGGTGAAGAAGGTGATGAAAAAAATATCCATGCATGCCTCAACTTCAGAAATTATAAATTTCAGTGATATGATATTGTCTCTGAACAGCGCTATTATTTGTAGAATTGCTTTAGGGAAAAGTTATGAGCAAGGAACAGAAAGGAACAAGTTCGATAGGTTGCTGAGTGAGTGTGAAACCATGATGAGTTCCTTCTTTGTTTCAGATTATATTCCTTTCATGAATTGGATTGATACACTCAGGGGAATTCATGCACGTCTCGAACGGACTTTCAAGGAGATGGATGATTTCTACCAAGAAATCATTGATGAACACTTGGAGTATTCTCAGAAAAAGACCCCAGAGGAAGAGGACATAGTTGATGTCTTACTTCAACTCAAAAAGCATCATTCGTTCTCCATAGATCTCACCAATGATAACATCAAAGCGGTGGTCATGAACATACTTGTAGGAGCAACAAGTACGACTACGGCCTCAACAATAGGGGCCATGACTGAACTACTAAAGAATGGAAACATGATGAAGAAAGTTCAAGAAGAAATAAGGAGTATAAGTGGTAAGAAAGATTTCTTGGATGAAGATGATGTTCAAAAGTTTCCCTATTTCAAGGCAATGGTGAAAGAGACGCTGAGATTGCACGCACCAGCACCACTACTTGTACCAAGAGAAACAGGTGAAAAATGCATGATAGATGGTTATGAAATTCCAGCCAAGACAATGATATATGTGAATGCTTGGGCTATCCATAGAGACCCTGAAGCTTGGAAAGATCCAGAACAGTTTATACCTGAAAGGTTTCTAAACAGCACTTTAGATCTGCAAGGAAAAGATTTTTGTTTCATTCCATTCGGTGCTGGTCGTAAAATGTGCCCTGGTTTGCATATGGCATTCGCCACATTGGATGTTATACTTGCTAACCTTCTTTACTCCTTCGACTGGCAATTGGTAGAAGGAACAGAAAGGAATGAGACGGATGCTAAAGTGTTGCCAGGACTTACACAGAACAAGAAGGAGTCTCTTCGTGTTTTGGCCAAGCGTCATGTGTGA 1500 0.394 MLSSFLLIPCLTFLVFLLFFFRFCTTSKKPSFPPGPRGHPIVGNLFQLDSSNLHEQLWEFSKRYGPLFSLQLGLRQAIVICSPKLAKEVMKDHDSECCRRPRLLGQQKLSYNGLDLAFSQYADYWREIRKICVVHVLSAKRVSCFSTIRHLEVKKVMKKISMHASTSEIINFSDMILSLNSAIICRIALGKSYEQGTERNKFDRLLSECETMMSSFFVSDYIPFMNWIDTLRGIHARLERTFKEMDDFYQEIIDEHLEYSQKKTPEEEDIVDVLLQLKKHHSFSIDLTNDNIKAVVMNILVGATSTTTASTIGAMTELLKNGNMMKKVQEEIRSISGKKDFLDEDDVQKFPYFKAMVKETLRLHAPAPLLVPRETGEKCMIDGYEIPAKTMIYVNAWAIHRDPEAWKDPEQFIPERFLNSTLDLQGKDFCFIPFGAGRKMCPGLHMAFATLDVILANLLYSFDWQLVEGTERNETDAKVLPGLTQNKKESLRVLAKRHV 499
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g01618 499 CDD CYP71-like 63 491 - -
Spst4g01618 499 PANTHER CYTOCHROME P450 71B11-RELATED 18 496 - -
Spst4g01618 499 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 434 443 IPR017972 GO:0005506|GO:0016705
Spst4g01618 499 PRINTS E-class P450 group I signature 61 80 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst4g01618 499 PRINTS E-class P450 group I signature 291 308 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst4g01618 499 PRINTS E-class P450 group I signature 311 337 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst4g01618 499 PRINTS E-class P450 group I signature 354 372 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst4g01618 499 PRINTS E-class P450 group I signature 85 106 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst4g01618 499 PRINTS E-class P450 group I signature 431 441 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst4g01618 499 PRINTS E-class P450 group I signature 179 197 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst4g01618 499 PRINTS E-class P450 group I signature 395 419 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst4g01618 499 PRINTS E-class P450 group I signature 441 464 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst4g01618 499 FunFam Cytochrome P450 83B1 19 494 - -
Spst4g01618 499 Coils Coil 325 345 - -
Spst4g01618 499 Gene3D Cytochrome P450 25 498 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst4g01618 499 Pfam Cytochrome P450 33 486 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst4g01618 499 SUPERFAMILY Cytochrome P450 33 495 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g01618 Spst-Chr4 55693257 55695041 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst4g01618 19 499 Cytochrome P450 AT4G31500 43.299 7.86e-152 441
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g01618 - - gmx:100796528 712.605