Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g01613 ATGGTCACAGCCCTAATACCTAACTTGATTCAGAAATATTCCAGGAAACAAAAATCAAAACTTCCCCCAGGTCCCAAACCATGGCCTATAGTGGGCAACCTTCCTGAAATGCTCTCAAACAAACCTGCCCATCAGTGGATACACAACCTCATGAAAGAAATGAACACAGAAATTGCATGTATCCGCCTAGGAAATACGTATGTTATCCCAGTGATATGTCCCACCATTGCCAGAGTGTTTTTGAGAGAACAAGATGCAATTTTTGCGTCGAGATCACTAACCACATGCACTGATCTCGTTAGTAGCGGATACTTAACCACAATTTTAGTGCCCTTTGGGGACCAATGGAAGAAAATGAAGAAAACCTTAAGCAATGCTTTGCTTTCCTCGCACCAGCTCCTAAGGTTCCATGACAAAAGGAATGAAGAAGCTGACAACCTTATGTTTTACGTCTACAACAAATGCAAAAACGTTAACGATGGTGTCGGTGGCCTTGTGAATATTAGGAGTGTTGCAAGGCATTATAGTGGCAACGTCATCAGGAAACTTGTTTTCAATACAAGGTATTTTGGGAAGGGTATGAAGGATGGAGAGCCTGGTTTTGAGGAAGTAGAACATGTTGATTCCATATTCGTTTTACTTAGGTATCTTTATGCCTTTTCTGTTTCTGATTATATGCCATGCTTGAGGGGACTTGACTTGGATGGCCATCAGAAGAAGGTGAAAGAAGCTTTGAGAGTCATCAAGAAATATCATGATCCCATCGTGGAAGAAAGAATTAAACAATGGAATGATACACCAAAGGTTGATGAAGAGGACTGGCTTGATATTCTGATCTCCTTGAAAGATGCCAACAATAAACCGTCATTGACGTTGGAAGAAATCAATGCACAAATTATAGACTTATTGATTGCAACAGTAGACAATCCATCAAATGCTTTTGAATGGGCACTTGCTGAAATGATAAACCAACCTAAGTTGCTCCAACGAGCCACTGAAGAATTGGACAGTGTGGTGGGAAAAGAGAGGTTGGTGCAAGAATCAGACGTACCAAAGCTCAACTATGTAAAGGCATGTGCAAGAGAAGCTTTTCGCCTTCATCCCATGGCACCTTTTAATCCTCCCCATGTCTCTCTGAGTGACACAACTGTGGGAAATTACTTCATCCCAAAGGGTAGCCATGTAATACTAAGTAGAAAAGAACTTGGAAGAAACCCAAAAGTTTGGAATGAACCCCACAAGTTTAAACCAGAACGTCATCTCAATGTGTCTAATGTAGTTTTGACAGAGCCAAATTTGAGGTTCATATCATTTAGCACAGGAATGCGTAGTTGTCCCGGAGTTATGCTTGGCACCACAATGACCGGGATGCTGTTTGCTAGGTTGCTGCATGGCTTCACTTGGAGTGCACCATTCAATGTTTCAACAATAAACCTAACTGAGTCCAAAGATGATATCTCTCTTGCAGAGCCTCTTGTGGCGGTTGCTAAGCCAAGATTAGCACCACAACTATATCAACTTTAA 1524 0.4154 MVTALIPNLIQKYSRKQKSKLPPGPKPWPIVGNLPEMLSNKPAHQWIHNLMKEMNTEIACIRLGNTYVIPVICPTIARVFLREQDAIFASRSLTTCTDLVSSGYLTTILVPFGDQWKKMKKTLSNALLSSHQLLRFHDKRNEEADNLMFYVYNKCKNVNDGVGGLVNIRSVARHYSGNVIRKLVFNTRYFGKGMKDGEPGFEEVEHVDSIFVLLRYLYAFSVSDYMPCLRGLDLDGHQKKVKEALRVIKKYHDPIVEERIKQWNDTPKVDEEDWLDILISLKDANNKPSLTLEEINAQIIDLLIATVDNPSNAFEWALAEMINQPKLLQRATEELDSVVGKERLVQESDVPKLNYVKACAREAFRLHPMAPFNPPHVSLSDTTVGNYFIPKGSHVILSRKELGRNPKVWNEPHKFKPERHLNVSNVVLTEPNLRFISFSTGMRSCPGVMLGTTMTGMLFARLLHGFTWSAPFNVSTINLTESKDDISLAEPLVAVAKPRLAPQLYQL 507
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g01613 507 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 438 447 IPR017972 GO:0005506|GO:0016705
Spst4g01613 507 FunFam Cytochrome P450 9 14 503 - -
Spst4g01613 507 CDD CYP79 56 500 - -
Spst4g01613 507 Pfam Cytochrome P450 22 480 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst4g01613 507 PANTHER CYTOCHROME P450 703A2-RELATED-RELATED 3 506 - -
Spst4g01613 507 PRINTS E-class P450 group I signature 398 422 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst4g01613 507 PRINTS E-class P450 group I signature 445 468 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst4g01613 507 PRINTS E-class P450 group I signature 357 375 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst4g01613 507 PRINTS E-class P450 group I signature 435 445 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst4g01613 507 PRINTS E-class P450 group I signature 175 193 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst4g01613 507 PRINTS E-class P450 group I signature 294 311 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst4g01613 507 PRINTS E-class P450 group I signature 314 340 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst4g01613 507 Gene3D Cytochrome P450 13 501 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst4g01613 507 SUPERFAMILY Cytochrome P450 22 499 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g01613 Spst-Chr4 55599233 55601170 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst4g01613 21 505 Cytochrome P450 AT5G05260 55.123 0.0 573
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g01613 - K14984 gmx:100809902 847.425