Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g01612 ATGGTCACAGCCCTAATACCTAACTTGATTCAGAAATATTCCAGGAAACAAAAATCAAAACTTCCCCCAGGTCCCAAACCATGGCCTATAGTGGGCAACCTTCCTGAAATGCTCTCAAACAAACCTGCCCATCAGTGGATACACAACCTCATGAAAGAAATGAACACAGAAATTGCATGTATCCGCCTAGGAAATACGTATGTTATCCCAGTGATATGTCCCACCATTGCCAGAGTGTTTTTGAGAGAACAAGATGCAATTTTTGCGTCGAGATCACTAACCACATGCACTGATCTCGTTAGTAGCGGATACTTAACCACAATTTTAGTGCCCTTTGGGGACCAATGGAAGAAAATGAAGAAAACCTTAAGCAATGCTTTGCTTTCCTCGCACCAGCTCCTAAGGTTCCATGACAAAAGGAATGAAGAAGCTGACAACCTTATGTTTTACGTCTACAACAAATGCAAAAACGTTAACGATGGTGTCGGTGGCCTTGTGAATATTAGGAGTGTTGCAAGGCATTATAGTGGCAACGTCATCAGGAAACTTGTTTTCAATACAAGGTATTTTGGGAAGGGTATGAAGGATGGAGAGCCTGGTTTTGAGGAAGTAGAACATGTTGATTCCATATTCGTTTTACTTAGGTATCTTTATGCCTTTTCTGTTTCTGATTATATGCCATGCTTGAGGGGACTTGACTTGGATGGCCATCAGAAGAAGGTGAAAGAAGCTTTGAGAGTCATCAAGAAATATCATGATCCCATCGTGGAAGAAAGAATTAAACAATGGAATGATACACCAAAGGTTGATGAAGAGGACTGGCTTGATATTCTGATCTCCTTGAAAGATGCCAACAATAAACCGTCATTGACGTTGGAAGAAATCAATGCACAAATTATAGACTTATTGATTGCAACAGTAGACAATCCATCAAATGCTTTTGAATGGGCACTTGCTGAAATGATAAACCAACCTAAGTTGCTCCAACGAGCCACTGAAGAATTGGACAGTGTGGTGGGAAAAGAGAGGTTGGTGCAAGAATCAGACGTACCAAAGCTCAACTATGTAAAGGCATGTGCAAGAGAAGCTTTTCGCCTTCATCCCATGGCACCTTTTAATCCTCCCCATGTCTCTCTGAGTGACACAACTGTGGGAAATTACTTCATCCCAAAGGGTAGCCATGTAATACTAAGTAGAAAAGAACTTGGAAGAAACCCAAAAGTTTGGAATGAACCCCACAAGTTTAAACCAGAACGTCATCTCAATGTGTCTAATGTAGTTTTGACAGAGCCAAATTTGAGGTTCATATCATTTAGCACAGGAATGCGTAGTTGTCCCGGAGTTATGCTTGGCACCACAATGACCGTGATGCTGTTTGCTAGGTTGCTGCATGGCTTCACTTGGAGTGCACCATCCAATGTTTCAACAATAAACCTAACTGAGTCCAAAGATGATATCTCTCTTGCAGAGCCTCTTGTGGAGGTTGCTAAGCCAAGATTAGCACCACAACTATATCAACTTTAA 1524 0.4147 MVTALIPNLIQKYSRKQKSKLPPGPKPWPIVGNLPEMLSNKPAHQWIHNLMKEMNTEIACIRLGNTYVIPVICPTIARVFLREQDAIFASRSLTTCTDLVSSGYLTTILVPFGDQWKKMKKTLSNALLSSHQLLRFHDKRNEEADNLMFYVYNKCKNVNDGVGGLVNIRSVARHYSGNVIRKLVFNTRYFGKGMKDGEPGFEEVEHVDSIFVLLRYLYAFSVSDYMPCLRGLDLDGHQKKVKEALRVIKKYHDPIVEERIKQWNDTPKVDEEDWLDILISLKDANNKPSLTLEEINAQIIDLLIATVDNPSNAFEWALAEMINQPKLLQRATEELDSVVGKERLVQESDVPKLNYVKACAREAFRLHPMAPFNPPHVSLSDTTVGNYFIPKGSHVILSRKELGRNPKVWNEPHKFKPERHLNVSNVVLTEPNLRFISFSTGMRSCPGVMLGTTMTVMLFARLLHGFTWSAPSNVSTINLTESKDDISLAEPLVEVAKPRLAPQLYQL 507
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Spst4g01612 507 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 438 447 IPR017972 GO:0005506|GO:0016705
Spst4g01612 507 Gene3D Cytochrome P450 13 500 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst4g01612 507 CDD CYP79 56 500 - -
Spst4g01612 507 PRINTS E-class P450 group I signature 398 422 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst4g01612 507 PRINTS E-class P450 group I signature 357 375 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst4g01612 507 PRINTS E-class P450 group I signature 435 445 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst4g01612 507 PRINTS E-class P450 group I signature 175 193 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst4g01612 507 PRINTS E-class P450 group I signature 445 468 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst4g01612 507 PRINTS E-class P450 group I signature 294 311 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst4g01612 507 PRINTS E-class P450 group I signature 314 340 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst4g01612 507 FunFam Cytochrome P450 9 14 503 - -
Spst4g01612 507 Pfam Cytochrome P450 22 491 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst4g01612 507 SUPERFAMILY Cytochrome P450 22 481 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst4g01612 507 PANTHER CYTOCHROME P450 703A2-RELATED-RELATED 3 506 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Spst4g01612 Spst-Chr4 55581333 55584402 Tandem
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst4g01612 21 505 Cytochrome P450 AT5G05260 54.918 0.0 573
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g01612 - K14984 gmx:100809902 849.351