Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g01611 ATGGTGTCCCCACTTCTACTCCTATGTTTTACTCTTCCCTTGATTTTGTTATTCTTTTTCCAATTTCGCAGAACCTTCAAGAACCCATCCCTTCCACCTGGTCCTAGAGGCCTTCCCATAATAGGAAACCTTCATCAGCTGGACAATTCCATTCTTTATTTGCAACTATGGCAATTCTCAAAGAAATACGGGCCTCTATTTTCCCTTCAATTAGGTTTAAGACAAGCCATAGTTGTTTCCTCACCTGAATTGGCCAAAGAGGTGTTGAAGGACCATGACCTTGTGGTTCGTGACCGACCTAAATTAATTGGCCAGCAGAAACTGTCCTACAATGGGTTAGAGATTATATTTTCCCCATATGGTGAGTTTTGGAGAGAAATAAGAAAAATCTGTGTTGTCCATCTCCTTAGCACCAGGCGTGTCTCAGGGTTTTCCTCAATAAGAAAGTTTGAGGTGAAGCAGACGATAGAAAAAATATCTAGACATGCCTCTTCTTCAAAGGCTACAAATTTGAACGAAGTGATGATGTCTCTTACTAGCACTCTCATATGTAGAGTTGCCTTTGGGAGAAGGTATGAAGATGAAGGAACTGAAAGGAGTAGGTTCCATGGCCTCCTCAATGAGTGTCAGGCCATGTGGGGCACCTTCTTTTTCTCAGATTATATTCCTTTCTTAGGTTGGATTGATAAATTCAGGGGACTTCATGCACGTCTTGAAAGTACTTTCAAGGAGTTGGACAAGTTCTACCAAGAAGTGATTGATGAACACATGAACCCTAACAGAAAGACCCCAGAGAACGAGGACATAATAGATGTCTTACTTCAACTCAAGAAGAAGCAGCGTTCGTTTTCCGTGGATCTCACAAATGATCACATCAAAGCTGTGCTCATGGATATGCTTGTAGCCGGAACGGATGCAACTGCAGCCACAATAGTGGGGGCTATGACTGCACTACTAAAAAATCCAAGAGTAATGAAGAAAGTTCAAGAAGAAATTAGGACTTTGGGGGGTAAGAAAGATTTTGTAGATGAAGATGACATTGAAAAGTTTTGCTATTTGAAGGCTGTGATAAAAGAGACACTGAGACTGCATCTTCCAGCACCACTTCTTGCGCCAAGAGAAACGAATGAAGCATGTACGATAGATGGTTATGAAATTCCAGCGAAGACAATAGTGTATGTGAATGCTTGGGCCATACATAGAGACCCTAAGGCTTGGAAAGACCCACATGAGTTTATACCGGAGAGGTTCTTAGACAGTACAATAGATTTTGGAGGGCAAGATTTTGAGTTAATTCCATTTGGTGCTGGTCGTAGAATTTGCCCTGGAAGGCCTACGGCAATTGCCTCATTGGATCTCATTCTTGCTAATCTTCTGAATTCATTTGATTGGGAATTGCCGGTGGGGATGAACAGAGAAGATATCGATACTGAAGTTTTGCCAGGACTTTCTCAACAGAGAAAGAATGCTCTGTGTGTTTTGGCTAAGCTTCGAGTCTAA 1500 0.4187 MVSPLLLLCFTLPLILLFFFQFRRTFKNPSLPPGPRGLPIIGNLHQLDNSILYLQLWQFSKKYGPLFSLQLGLRQAIVVSSPELAKEVLKDHDLVVRDRPKLIGQQKLSYNGLEIIFSPYGEFWREIRKICVVHLLSTRRVSGFSSIRKFEVKQTIEKISRHASSSKATNLNEVMMSLTSTLICRVAFGRRYEDEGTERSRFHGLLNECQAMWGTFFFSDYIPFLGWIDKFRGLHARLESTFKELDKFYQEVIDEHMNPNRKTPENEDIIDVLLQLKKKQRSFSVDLTNDHIKAVLMDMLVAGTDATAATIVGAMTALLKNPRVMKKVQEEIRTLGGKKDFVDEDDIEKFCYLKAVIKETLRLHLPAPLLAPRETNEACTIDGYEIPAKTIVYVNAWAIHRDPKAWKDPHEFIPERFLDSTIDFGGQDFELIPFGAGRRICPGRPTAIASLDLILANLLNSFDWELPVGMNREDIDTEVLPGLSQQRKNALCVLAKLRV 499
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g01611 499 PRINTS E-class P450 group I signature 291 308 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst4g01611 499 PRINTS E-class P450 group I signature 60 79 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst4g01611 499 PRINTS E-class P450 group I signature 84 105 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst4g01611 499 PRINTS E-class P450 group I signature 441 464 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst4g01611 499 PRINTS E-class P450 group I signature 354 372 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst4g01611 499 PRINTS E-class P450 group I signature 311 337 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst4g01611 499 PRINTS E-class P450 group I signature 395 419 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst4g01611 499 PRINTS E-class P450 group I signature 178 196 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst4g01611 499 PRINTS E-class P450 group I signature 431 441 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst4g01611 499 PRINTS P450 superfamily signature 432 441 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst4g01611 499 PRINTS P450 superfamily signature 355 366 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst4g01611 499 PRINTS P450 superfamily signature 302 319 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst4g01611 499 PRINTS P450 superfamily signature 441 452 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst4g01611 499 PANTHER CYTOCHROME P450 71B11-RELATED 16 495 - -
Spst4g01611 499 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 434 443 IPR017972 GO:0005506|GO:0016705
Spst4g01611 499 SUPERFAMILY Cytochrome P450 32 498 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst4g01611 499 Gene3D Cytochrome P450 25 497 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst4g01611 499 FunFam Cytochrome P450 83B1 18 494 - -
Spst4g01611 499 CDD CYP71-like 62 491 - -
Spst4g01611 499 Pfam Cytochrome P450 32 488 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g01611 Spst-Chr4 55557788 55559851 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst4g01611 5 493 Cytochrome P450 AT4G31500 48.374 1.31e-165 476
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g01611 - - gmx:100801312 806.594