LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Spst4g01595	ATGGATGGAAATTTTTATGCCACTTGTAGAAGGGAATGTAGTATTTGCCTGTATGATTTACACTTGTCTGTTGTAGGGTGTTCATGTTCAAATGACAAGTTTGCGTGTCTTGGTCATGCAAAACATTTTTGTTCTTGCCCTTGGAGCAACAGAATTCTCTTATATCGTTACGAGATCAGTGATTTGAATGTTCTTTGTCAAGCTTTGGATGGGAAATTAAGTGCAGTCTATAAATGGGCCAAAGAGTATCTCGGACTAACACTGACCTCTGTTGCCTCCAAGAGATCAAAACCACATCCAGAAAATGTTGGTTGTTCAACCTTCCCTTTGCAAGACTTGCATATGAAAGAACCTATATTCCAGACATCATCAAATGAATCCTCAAAAGGGAAACGACGCAAATTGCAGGAAATATTGAATTCATCAAAGAAAAATCACAATGAAGTGGTTTCAAGTTCTTCGAAAAAGAAACAAAATGAAGTGGTTCCAAACTCATCCAAGAAAAAACAAAATGAAGTGATTTCCCAGGTCCCGCAGACTTCTGGTGGCACTCACACTAATCATGACACTCATTCAAAAATGAAGATAAATTTGCTTCAGTCAAGCTTTGCAGATGGTAAGAAAGGAATCAATTCTGTTGGCACTAAAATTGATACGAAGATGGCTGGGCATGAGTTAACAATTTCAAGGAAAGGAGATCCAAAATCATCTAAAGTTCCTTCTGTTACAAACTCACGTTACTTGTCTTTTCTTCAAGAACATGAGTTACTTGATGTTTCATCTGATAGTATGAGCACATCTTCGTCATCAGATTCTGAAGTTGCATGA	828	0.3756	MDGNFYATCRRECSICLYDLHLSVVGCSCSNDKFACLGHAKHFCSCPWSNRILLYRYEISDLNVLCQALDGKLSAVYKWAKEYLGLTLTSVASKRSKPHPENVGCSTFPLQDLHMKEPIFQTSSNESSKGKRRKLQEILNSSKKNHNEVVSSSSKKKQNEVVPNSSKKKQNEVISQVPQTSGGTHTNHDTHSKMKINLLQSSFADGKKGINSVGTKIDTKMAGHELTISRKGDPKSSKVPSVTNSRYLSFLQEHELLDVSSDSMSTSSSSDSEVA	275

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Spst4g01595	275	MobiDBLite	consensus disorder prediction	139	190	-	-
	Spst4g01595	275	Pfam	C5HC2 zinc finger	13	63	IPR004198	-
	Spst4g01595	275	PANTHER	LYSINE-SPECIFIC DEMETHYLASE	10	181	-	-
	Spst4g01595	275	MobiDBLite	consensus disorder prediction	142	190	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Spst4g01595	Spst-Chr4	55293535	55294362	Dispersed/Transposed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Spst4g01595	1	93	JUMONJI Transcription Factor Family	AT1G08620	54.839	1.16e-32	124

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Spst4g01595	K11446		-	gsj:114398457	345.895