Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g01582 ATGAGCGACGGCGAAAGTGCCTCCGCGCGATCGATTAATTTCGAGGACATCACAGTGGTCTCCGCCGTGGGGCGCGGCGCCAAGGGTGTGGTGTTTCTGGCGCGCGCCGATGATCGGTGGGCGAGCGAGTGCGTGGCGCTGAAAGTGATGTCGAAGGCGCTGATTGCGCAGAAGAAGGCGAGAAAGGAGGCGGAGGAGTACGGGAGGGTGTCGTTTGAAGAGGAAGTGCTGCGTCGTTTCGATCACCCGCTCTTACCAAGGCTGAGAGGCGTTTTGGAAACGGAGAAAGTGGTTGCGTTCGCCATTGATTACTGCCACGGTGGCACGCTCCATTCTCTCAGGAAGAAACAGACTGAGAAAACGTTCTCCGATGACACCATCAGGTTTTACGCTGTGGAATTGGTCCTGGCATTGGAATATTTACACGAACTGGGAATAGTATACAGAGATTTGAAGCCAGAGAACGTTATGATTCAAGAAAACGGCCACATAATGCTGGTCGATTTTGATCTCTCCAAAAAGCTAAATTCTAAATCTCCTCACTCACTGAGTCGAAACTCGTCCCCGAGTCTTAACTCAGAGAAACGTTTAAGAAAAAAACGGCTAACTCGTTTATACAGTTTTTGTAACTCGGGCATCTCGCCGTTAGACTCCGACTCGGAGCCCCCACTCCGCAGGTCCGACTCAGTGCGTCCCACCGAGTCTGACTCGGTTGAGAAATCAAATTCGTTCGTTGGAACAGAAGAGTACGTGGCACCAGAAATCTTGTCAGGAAAAGGTCACGGGTTTAGCGTAGATTGGTGGTCATACGGGGTCGTTTTATACGAGATGCTGTACGGCACGACGCCGTTTAAGGGCTCAAATAGAAAGGAAACGTTTTACCGAATTTTAACAGTTGAGCCAGAGTTAACGGGAGAGAAGACGGCGTTACGGGATTTAATTGCAAGATTATTGGAAAAGGATCCCGAGCGTCGGATCCAGGTGGAGGAGATCAAGGGCCACGAGTTCTTCAAAGGGGTGAAGTGGGAGAAAGTGTTGCACATTGCAAGACCACCTTATATTCCTGAAAATGAGGTCGAAAACAAAGTGGGGTTCAGCAAAAACGACGTGGAAGTGTTTGTGAACGAAGTGTTTTTCTCCACGAATGATGATGACGGTAGCGTAGAGAAAACAAAAACGGTGTTGGAAACGAAGGGTAATAATTGTGAGAACAACAACACGGCGTGGGTTGATGAATTGAATCACATTCCCACTCAGAAGAACCACGATTTTTTGATTTTTTGA 1284 0.4883 MSDGESASARSINFEDITVVSAVGRGAKGVVFLARADDRWASECVALKVMSKALIAQKKARKEAEEYGRVSFEEEVLRRFDHPLLPRLRGVLETEKVVAFAIDYCHGGTLHSLRKKQTEKTFSDDTIRFYAVELVLALEYLHELGIVYRDLKPENVMIQENGHIMLVDFDLSKKLNSKSPHSLSRNSSPSLNSEKRLRKKRLTRLYSFCNSGISPLDSDSEPPLRRSDSVRPTESDSVEKSNSFVGTEEYVAPEILSGKGHGFSVDWWSYGVVLYEMLYGTTPFKGSNRKETFYRILTVEPELTGEKTALRDLIARLLEKDPERRIQVEEIKGHEFFKGVKWEKVLHIARPPYIPENEVENKVGFSKNDVEVFVNEVFFSTNDDDGSVEKTKTVLETKGNNCENNNTAWVDELNHIPTQKNHDFLIF 427
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g01582 427 Pfam Protein kinase domain 19 180 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst4g01582 427 Pfam Protein kinase domain 239 337 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst4g01582 427 Gene3D Phosphorylase Kinase; domain 1 16 108 - -
Spst4g01582 427 PANTHER FLIPPASE KINASE 1-RELATED 10 362 - -
Spst4g01582 427 ProSitePatterns Serine/Threonine protein kinases active-site signature. 146 158 IPR008271 GO:0004672|GO:0006468
Spst4g01582 427 MobiDBLite consensus disorder prediction 217 243 - -
Spst4g01582 427 ProSiteProfiles AGC-kinase C-terminal domain profile. 338 427 IPR000961 GO:0004674|GO:0005524|GO:0006468
Spst4g01582 427 Gene3D Transferase(Phosphotransferase) domain 1 237 356 - -
Spst4g01582 427 SMART serkin_6 17 337 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst4g01582 427 SUPERFAMILY Protein kinase-like (PK-like) 14 359 IPR011009 -
Spst4g01582 427 Gene3D Transferase(Phosphotransferase) domain 1 109 179 - -
Spst4g01582 427 FunFam Serine/threonine-protein kinase OXI1 239 356 - -
Spst4g01582 427 ProSiteProfiles Protein kinase domain profile. 17 337 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst4g01582 427 MobiDBLite consensus disorder prediction 221 235 - -
Spst4g01582 427 FunFam Serine/threonine-protein kinase OXI1 109 177 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g01582 Spst-Chr4 55164812 55168008 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst4g01582 1 427 AGC Kinase Gene Family AT3G25250 56.364 4.31e-157 448
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Spst4g01582 Pkinase 2.5e-33 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g01582 K20714 - gmx:100785773 624.78