Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g01575 ATGGAATTCGCGTCTTCTTCATCATCCAAACACCAACGGTGGATACACGACGTGTTCATCAATTTTAGGGGAGAAGACACCCGCAGGAAGTTCGTTTCTCATCTCCACTATGCCTTCTCGAATGCTGGAGTCAACACTTTCTTTGATGAACAGAATCTTGTCAAGGGAATGCAGCTTCAAGAACTCATGCGAGCAGTAGAAGGGTCTCAGATAGCAATTGTTGTTTTCTCCAAAACCTACACTGAATCAACTTGGTGCCTTGAGGAGCTCGAGAAAATCATCAAATGCCACGAAACCCAAGGCCAAAGTGTTCTGCCTGTGTTTTATGACATTGATCCATCCGATGTTCGTCATCAGAAGGGTGAATTTGGAAAAGCGTTGGAAGAAGCTGCACAGAAAAGCTATTCAGGAGAACAGCTGAAGCATGCTCTGTCCAGGTGGGGCCGCGCACTCACCAAAGCTTCAGGTATCACTGGTTGGGATGTCAGAAATTTCAGGAATGAAGCTGAACTAGCGAAGCAAATTGTTAACCGCGTTCAGACATTACTGGACTACGAAGTCCTATCTATTACAGAATTTCCTGTTGGACTAGACTCCCGTGTGCAAGAAGTGATGGGATTCATTGAAAAGCGTTCCACCCAAGTCTGCACGATAGGGATTTGGGGTATGGGGGGATCGGGGAAAACTACCCTTGCCAAAGCCATCTACAATCAGATTCATCACAGAGGTTATGTCACGGAGATACTTAATGGTTGTGGACTATGCGCTGATATTGGAATACCAGTTCTCATAGAACGTAGCCTCATAAAAGTAGAGAAGAAAAACAAACTTGGAATGCATCCTTTGCTACAAGAAATGGGAAGAGAGATAATTCGTGAAAACTCAAGAAAGGAACCTGGGAAGCACAGCCGATTATGGTTTCAAAAGGATGTAGTTGAAGTATTGACAAAGAATACTGGGACAGAGGCCATTGAGGGATTAGTTCTGAAAATGCATTTAACCAGCATAGATTGTTTCAAAGCTGATTCTTTCGAGAAATTGAAGAGATTGAGACTGTTGCAACTCGACCATGTACAACTTGCTGGAAATTATGGGTACCTTTCTAAGGAACTGAGATGGATCTGTTGGAAAGGGTTTCCTTCAAATTACTTACCAAACAACTTTGATATGGAAGATGTAATTGCGATTGATTTAAAACACAGTCATCTTCGGTTTGTCTGGAAACAACCTCAGGTTTTGGGGTCGCTAAAAGTCCTTAATCTTAGTCACTCCAGGTACTTGATAGAAACGCCTGACTTTTCAACACTACCAAGTCTTGAACAGCTCATTCTCAAAGATTGTCCAAGTTTGCGCAAGGTACACAATTCCATTGGAGATCTCTGCAATATTGTATTGATAAATTTCAAGGATTGTACAGGCCTAAGCAATCTCCCCAGAGAGATATATAAGTTGAAATCTTTGAAAACGTTCATCCTATCTGGTTGTTCAAAGATTGACACATTGGAAGAAGATATAGCCCAGATGGAATCCTTGACAACTCTAATTGCTGAAAATACTGCAGTGAAAAAAGTCCCCTTTTCAATAGTAAGATCGAAATGCATCGGGTATATATCCTTATGCGGTTTTGAAGGACTGGCACGAAATGTTTTTCCTTCTATCATCCAATCTTGGGTGTCACCAACAATGAATCCCCTCTTTCGTATTCGTCCTTTTTGTGGCACATCATGTTCTCTGGTTTCCATGGATACGCAGAATAATATTTTGGGTGATCTTGCACCAATTCTTAGAAGCCTTTCAAATCTTCGAAGTGTTTTGGTACAATGTGAGACAGAGGTTCAACTATCTAAACAAGTAAAAACAATTCTGGTTGAAGATGTCGTAAATTTTAAAGAATTTGGAATTTCAAAGCATCATTTGAGGTCTTATTTGATTGGAATTGGAAGTTACAAACAGAACTGCAATATTCTCAACGATATCATATCTGAGGTTACCTTCTCTTCTCTAGCTTTGCCTTTGTCTACTATACCTGAACTATTTATTTTAGCTATTGATAAAGAGAACATAAAATAA 2070 0.4039 MEFASSSSSKHQRWIHDVFINFRGEDTRRKFVSHLHYAFSNAGVNTFFDEQNLVKGMQLQELMRAVEGSQIAIVVFSKTYTESTWCLEELEKIIKCHETQGQSVLPVFYDIDPSDVRHQKGEFGKALEEAAQKSYSGEQLKHALSRWGRALTKASGITGWDVRNFRNEAELAKQIVNRVQTLLDYEVLSITEFPVGLDSRVQEVMGFIEKRSTQVCTIGIWGMGGSGKTTLAKAIYNQIHHRGYVTEILNGCGLCADIGIPVLIERSLIKVEKKNKLGMHPLLQEMGREIIRENSRKEPGKHSRLWFQKDVVEVLTKNTGTEAIEGLVLKMHLTSIDCFKADSFEKLKRLRLLQLDHVQLAGNYGYLSKELRWICWKGFPSNYLPNNFDMEDVIAIDLKHSHLRFVWKQPQVLGSLKVLNLSHSRYLIETPDFSTLPSLEQLILKDCPSLRKVHNSIGDLCNIVLINFKDCTGLSNLPREIYKLKSLKTFILSGCSKIDTLEEDIAQMESLTTLIAENTAVKKVPFSIVRSKCIGYISLCGFEGLARNVFPSIIQSWVSPTMNPLFRIRPFCGTSCSLVSMDTQNNILGDLAPILRSLSNLRSVLVQCETEVQLSKQVKTILVEDVVNFKEFGISKHHLRSYLIGIGSYKQNCNILNDIISEVTFSSLALPLSTIPELFILAIDKENIK 689
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g01575 689 Gene3D Ribonuclease Inhibitor 322 643 IPR032675 -
Spst4g01575 689 Pfam TIR domain 16 179 IPR000157 GO:0007165
Spst4g01575 689 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 185 242 IPR027417 -
Spst4g01575 689 SMART till_3 15 157 IPR000157 GO:0007165
Spst4g01575 689 Gene3D - 9 191 IPR035897 -
Spst4g01575 689 Pfam NB-ARC domain 200 239 IPR002182 GO:0043531
Spst4g01575 689 SUPERFAMILY L domain-like 329 608 - -
Spst4g01575 689 ProSiteProfiles TIR domain profile. 14 183 IPR000157 GO:0007165
Spst4g01575 689 SUPERFAMILY "Winged helix" DNA-binding domain 245 315 IPR036390 -
Spst4g01575 689 FunFam Disease resistance protein (TIR-NBS-LRR class) 12 185 - -
Spst4g01575 689 SUPERFAMILY Toll/Interleukin receptor TIR domain 5 160 IPR035897 -
Spst4g01575 689 Gene3D - 195 274 IPR027417 -
Spst4g01575 689 PRINTS Disease resistance protein signature 482 498 - -
Spst4g01575 689 PRINTS Disease resistance protein signature 217 232 - -
Spst4g01575 689 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 16 241 IPR044974 GO:0006952
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g01575 Spst-Chr4 55006241 55009316 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst4g01575 235 528 WRKY Transcription Factor Family AT4G12020 32.581 4.68e-36 144