Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g01566 ATGCTGAATCTGCTTGGTGTCTTCATGAGCTTCAACAAATCATTAGATGGCATGAAACTTATTGCCGGCATGAGTGATGCTGAACTAGTGAACAAAATTGTTAAGAGCGTTCTTAATTTACCAATCTTGACTGCTACCAAATTTCCAGTTGGATTACAGTCCCCTGTGGAAAAACTGATTCAATATATTACAAATACCCCAGTCACTACTATAATAGGGATATGGGGAATGAGTGGAGTGGGTAAAGCCACCGTTGCCAAAGCCGTCTACAACCAAATTCATGACAGAGACTATGTTACAGAGATACTAAATGGCTGTGGACTACATGCTGATATTGGAATAACAGTTCTCATAGAGCGTAGTCTCATAAAAGTTGATCAGAACAACAAACTAAGAATGCATCCTTTGCTGCAAGACATGGGTAGAGAGATTATTCTTAGAAGTTCAACTACGGAACGTGAGAAGCGCAACCGACAGTTTGCTGATGATGTAAAATGTGTAGTGACAAAGAATAATGGAACAGAAGCTATTGAAGGATTGGCTCTGAAGTCACCATTATCAGTCGGATCTAGGTTGAAAATTTATGCTTTGCAGAAAAAACAGATATTGAGACTGCCGAACATTGACTCTTTACTACTGAGTAGAGACTATCCGAACCTTTCTAAGCAACTGAGATGGATCTTTCTTCTAGGGTTTCCTTTAAAATTTATTCATAAAAACTGTGATATGGAAGGTGTAATTGCGATTCATTTCAAATGCAGTAATCTTAGACGACTCTGGAACGAACCACCGGTTTTAGGGTGGCTAAAGTTCCTCAATCTAAGCCACTCCAAGTACTTGACAGAAACATCTGACTTTTCAGGACTACCAAGTCTTGAAAAGCTCATTCTCAAAGATTGTCCAAGTTTGTGCAAGGTACACCAATCCATAGGAGATCTCTGCAATCTACTACTCATGAATTTGAAGGACTGTATAAGTCTTAGCAATCTCCCCAAAGAGGTATATAAGTTGAAATCTTTAAAAACTCTCATCCTTTCTGGTTGTTCCAAGATTGAAATTTTGGAAGAAGATATAATGCAGATGGAATCCTTGATAACACTAATTGCTGAAAATAAAGCAGTGAAACAAGTGCCCTTCTCAATTGTAAGCTCAAAATGCATTGGATATATATCCTTACGTGGATTTGAAGGATTGTCACACAATATTTTTCCTTCTATCATTCGGTCTTGGATGTCACCAACAATGAATCCCCTATCTTATATTAGTCCGTTTTGCATGGATATGGAGAATAATAATTTGCCTGACCTTGTGCCATTGTTTAGCAACCTTGCAAATCTTCGAAGTATTTCTGTTCAATGTGACGCGGAGCTTCAACTATCTAAGCAAGTAAATACAATTCTTGTCGAATACAGAGTAAATTTTACAGAATTAAGGATTTCAAAGCATCACTTGAGGTTTTCTTTGATTGCTGTTGGACGATGCAATGAATTCTTCAACTCTCTCAATGATAGCATATATGAGGCATTCTCAAGGAGTGAATCTTGTGATGTTTGTCTGCCAGGTGACAACCACCCTTATTGGTTAGCCCATGTGGGTGAGGGAAATTCAATTTATTTCATTATGCCTCAGGACTGTGACGTAAAAGGAATGGCTTTGTGTGTTGTTTATTTGTCAACCCCTGAGAACATGGCAATCGAAGGTCTTACAAGTGTCTTAATTGTTAACTACACAAAGTGCACATTCCAGATACATAAGCATGGTACAGGAATTTCCTTCAATGATAAAGATTGGGAGGGCATAATATCATATTTAGGATCTGGAGACAAGGTGGAGATTTTTGTGACTCTTCCTCATGGATTGGTGGCTAAGAACACAGCTGTGTATATCTGA 1890 0.3825 MLNLLGVFMSFNKSLDGMKLIAGMSDAELVNKIVKSVLNLPILTATKFPVGLQSPVEKLIQYITNTPVTTIIGIWGMSGVGKATVAKAVYNQIHDRDYVTEILNGCGLHADIGITVLIERSLIKVDQNNKLRMHPLLQDMGREIILRSSTTEREKRNRQFADDVKCVVTKNNGTEAIEGLALKSPLSVGSRLKIYALQKKQILRLPNIDSLLLSRDYPNLSKQLRWIFLLGFPLKFIHKNCDMEGVIAIHFKCSNLRRLWNEPPVLGWLKFLNLSHSKYLTETSDFSGLPSLEKLILKDCPSLCKVHQSIGDLCNLLLMNLKDCISLSNLPKEVYKLKSLKTLILSGCSKIEILEEDIMQMESLITLIAENKAVKQVPFSIVSSKCIGYISLRGFEGLSHNIFPSIIRSWMSPTMNPLSYISPFCMDMENNNLPDLVPLFSNLANLRSISVQCDAELQLSKQVNTILVEYRVNFTELRISKHHLRFSLIAVGRCNEFFNSLNDSIYEAFSRSESCDVCLPGDNHPYWLAHVGEGNSIYFIMPQDCDVKGMALCVVYLSTPENMAIEGLTSVLIVNYTKCTFQIHKHGTGISFNDKDWEGIISYLGSGDKVEIFVTLPHGLVAKNTAVYI 629
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g01566 629 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 32 120 IPR027417 -
Spst4g01566 629 Gene3D - 33 167 IPR027417 -
Spst4g01566 629 Gene3D Ribonuclease Inhibitor 189 513 IPR032675 -
Spst4g01566 629 PRINTS Disease resistance protein signature 71 86 - -
Spst4g01566 629 PRINTS Disease resistance protein signature 335 351 - -
Spst4g01566 629 SUPERFAMILY L domain-like 132 453 - -
Spst4g01566 629 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 21 94 IPR044974 GO:0006952
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g01566 Spst-Chr4 54756174 54760089 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst4g01566 280 394 WRKY Transcription Factor Family AT5G45050 33.043 1.96e-06 49.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g01566 - - pvu:PHAVU_010G027900g 726.087