Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g01562 ATGGAATGCCATGCTTCTAGAGGTCAAGTGGTTTTGCCCGTATTTTACTTCATTAGCCATTGGTCTCTACGTGACCTGAGGGATGTTTCTTTCGAAGTCATTTTTCAACAAGCTGGTGACATCAGCAGGGAGAGACAATGGCAGTTTGCACTGAGTAATGCAGCGCGTTTAGCAGGCTGGGATGTTTTAAATTACATGTATGCATATGCTTTTTGGAAGGACAGAGACTATGTCACAGAGATACTAAATGATTGTGAACTTCATGCTGATATTGGAATAACAGTCCTGCTAGAAAGGAGCCTCATCAAAGTTGAAAAGTATAACAAACTTGGAATTCATGATTTGCTACGAGACATAGGTAGAAAAATAGTTCATCAAATTTCACCTCTAGAACCACAGAAGCGCAGTCGATTGTGGGTTCATGATGATATAGTTGATAAATTGACAGAACAAACTGCAACAGGAGTCATTGAGGGATTGGCTTTGAAGATGCAAAGAACCAGCAGAGTTTGTTTCAGTACTGAAGCGTTTGAGAAAATGAAGAAACTGAGACTTTTGCAACTTGATCATGTGTACAAACTTGCTGGAGATTATGGGAATCTTCCCAAACAACTGAGATGGTTGCTGGAGAGGCTAAAATTCCTTAATCTTAGTTCCAAGCACTTATCAAAGACCCCAGATTTTTCAAAACTACCAAATCTTGAGAAGCTCATTCTCAAAGATTGTCCAAGCTTGATTGGATATGTATCCCTTCGTGGATATGAAGGATTGGCACGTGATGTATTTCCTACTCTCATATGGTCATGGATGTCACATACAGGAGGTTTTTCATCCTGTATTCAACCATTTGGGATCATTCCAACATCTATTGTCTCCATGGATATACTGGATAATTTTCAAATAACACAAGAACTAAGGATGATTCGGGATGAGTTATGCAATGTAAATTTTTCTGAATCGAAAAACGCATATTTATCACAAATTTCAGAAATGTCTATAGTATCACATTTGACTGGAATGGGAAGCTGCCACCAAGTCTTCGATATGCTTAGCAATAGCATATCAGAGGCCTTGAGAACCAATGGTTGCACTGATTTTGTCCTTCCAGGGGACAATTATCCTTATTGGTTAGCCTATACAGGGAACGGTTATTCGATATATAAGCAAGCAACAACAATGACCTTCACTGATGAAGATTGGCAGGGTGTAATATCAAATCTAGGACCTGGTGACAATGTGGAGGTTTTTGTAGGTATTGACCATGGAATCACTGTTAAGAAAACAGCAGTGTATCTTATATATGGTCAGTCAATTACAATGAGAATAGAGCCACGTGAGCTGAGTGTGACTGTCACCTGA 1359 0.3929 MECHASRGQVVLPVFYFISHWSLRDLRDVSFEVIFQQAGDISRERQWQFALSNAARLAGWDVLNYMYAYAFWKDRDYVTEILNDCELHADIGITVLLERSLIKVEKYNKLGIHDLLRDIGRKIVHQISPLEPQKRSRLWVHDDIVDKLTEQTATGVIEGLALKMQRTSRVCFSTEAFEKMKKLRLLQLDHVYKLAGDYGNLPKQLRWLLERLKFLNLSSKHLSKTPDFSKLPNLEKLILKDCPSLIGYVSLRGYEGLARDVFPTLIWSWMSHTGGFSSCIQPFGIIPTSIVSMDILDNFQITQELRMIRDELCNVNFSESKNAYLSQISEMSIVSHLTGMGSCHQVFDMLSNSISEALRTNGCTDFVLPGDNYPYWLAYTGNGYSIYKQATTMTFTDEDWQGVISNLGPGDNVEVFVGIDHGITVKKTAVYLIYGQSITMRIEPRELSVTVT 452
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g01562 452 Gene3D - 1 90 IPR035897 -
Spst4g01562 452 Gene3D Ribonuclease Inhibitor 156 360 IPR032675 -
Spst4g01562 452 ProSiteProfiles Leucine-rich repeat profile. 211 232 IPR001611 GO:0005515
Spst4g01562 452 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 80 337 IPR044974 GO:0006952
Spst4g01562 452 SUPERFAMILY L domain-like 174 326 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g01562 Spst-Chr4 54695433 54699483 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst4g01562 74 244 WRKY Transcription Factor Family AT4G12020 33.140 2.75e-15 77.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g01562 - - mtr:25501052 286.574