Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g01552 ATGCCTTCCTATTCTTCATCGTCATCATCCTTCTCAAAATCAAAATCGAAACCGCAATGGAGAAACGATGTGTTCATTAATTTCCGGGGGGAAGACACTCGTAGGAATTTCGTTTCCCATCTCTATTCTGCCCTCATAGAGAGTGGAGTCAACGCTTTTCTGGACGATGAGAAGCTTGCCAAGGGAGAAGAGCAGAAATCTGAACTGTTGCATGCGATAGAAGGGTCTCAAATATCCATCGTTGTTTTCTCCCGAAACTACATTCACTCTACATGGTGTCTGGATGAACTCCTCAAAATCATGGAATGCCATGCTTTTAGAGGACAAGTGGTATTGCCAGTATTTTACGATATTGGGCCCTCATTTTTACGTGACGCCCAATATATTTCGTTCGAAGTCATTTCTAACCAGCTGAACAGGATAAAACCATGGAAGAAAGCACTGTCACAAGCAGCAAATTTAGCAGGTTGGGATATGAGAAATTACAGAAGTGACAATGATGTTATGAAGGAAATTGTTGGTGAAGTTTTGAAAAGACTGGATAAAACATACTTGTCTATCACAAAATTTCCAGTTGGACTAGAATCCCGTCTGCAGCATGACAGAGGCTATGTCACAGAGATACTTAATGGTTGTGGCCTTCACGCTGATATTGGAATAACAGTCCTGGTAGAAAGGAGCCTCATCAAAGTTGAAAAGAATAACAAACTTGGAATTCATCATTTACTACGTGACATGGGAAGAGAAATTGTTCGTCAGAGTTCACCACTACCACAAAGGCGCAGCCGATTGTGGCTTCATAATCACGTACTTGATATATTGACAGAACATACCCGCACTCCTGCTGGAACAGAAGCTATTGAGGGATTAGCTTTGAAATTGCAGAGAACTAGCAGAGTTCGCTTCAGTGCCGAAACATTTGAGGAAATGAAAAGACTGAGGCTTTTGCAATTTGATCATGTCCAACTTGCTGGGGATTATGGGCATCTTTCCAAACACTTGAGATGGGTCTATTGGAGAGGATTTTCATCAAAATTCATACCTGATAACTTTTATCAGGGAAACGTAGTTGCTATTGACATGAAACACAGTAATCTTAAGCTAGTTTGGAAGGAGCCCCTACACCCGTTGCTGGAAGGGCTAAAGTTCCTCAATCTTAGTCATTCCAAATTCTTATCAAAGACCCCTAACTTTTCAAACCTACCAAATCTTGAGAGACTCATTCTAAAAGATTGTCCAAGCTTGTCTGAGGTGCACCATTCCATTGGTGATCTGCGTAATCTTCTTTATTTAAATTTGAAGGACTGTACATGCCTTCAGAATCTCCCAGTAATAATCTATAAGTTGAAGTCTTTGAAAGTACTCATCCTTTCTGGTTGTTCCAAGATCGACAAGTTAGAAGAAGACATAGTACAAATGGAATCCTTAACAACTCTAATTGCACACAATACTAGCCTAAAACAAGTTCCCTTTTCTATAGTAAGATCCAAAAAGATTGGATATCTATCATTTTGTGGATATGAAGGATCAGCACGTGATATATTTCCTTCTATCATATGGTCTTGGATGACACCAACAAGAGGCCTTGTATCCTCTATACAATCATTTGGGAGCACGTCAACATCTTTAGTCTCTGTGTATATACAGGATAACAATTTGAGCAACCTATTATCAGAGGTTAGTGAATTTCCAAAACTTCGAAGTATTTGCGTGCAATGTTACTCAGATCTTCAACTAACTCAAAAATTAAGAATTGTGGATGACTTCTGCAATGTAAATTTTGCAATGGAAACAACATATGCATCACAAATTTCAGAAAGTTCTATGGTATCTCGGTTGATTGGAATGGGAAGTTACTACCAAGTCATGGATATGCTTAACGATAGCATATCAGAGGTTCCCTCTATATCTCTCTACTCTCAAGTCTTTTTCATGATACAGGTAATGAAAACTCATAGTTCCAGTGATTTTGTCCTTCCAGGGGACAATTATCCTTATTGGTTAGCCTATACAGGGGAAGGATATTCAGTACCTTTCCAAGTACCTGATGATAGTGATTGCCCGATGAAGGGGATGACTTTGTGTGCTATTTGTTCGTCAACCCCTGAAAACATGGCAACTGAAAGTCTTGCTAGTGTCTTCATCTTTAATTACACAAAGTACACCATTCAGATATATAAGCAATCAACAACAATGTCCTCTACTGATGAAGATTGGGCAGGCATAATATCAAATCTAGGACCTGGTGACAATGTGGAGATTTTTGTATGTTTTGGGCATGGAATGACAGTTGAGAAGACAGGTGTCTATCTAATATTTGGTCAGTCAGTTACAAGAATGGAGCCATCACCTGAAGTGAGTGCACCGCCATCAGGTGACGGGAGTGTGCTATCATCACCTGAAGTGGAAATGGAGCCATCTCTTAATGCCCAAATGGAGCCATCTCTTAATGTCCAAATGGAACTATCAAAGAAGCCCAAGAAAGATATCTTTTCAAAAAGTGCAAAGAAAATGAAAGCATGTTTTTGCTTGAGTTAG 2538 0.3956 MPSYSSSSSSFSKSKSKPQWRNDVFINFRGEDTRRNFVSHLYSALIESGVNAFLDDEKLAKGEEQKSELLHAIEGSQISIVVFSRNYIHSTWCLDELLKIMECHAFRGQVVLPVFYDIGPSFLRDAQYISFEVISNQLNRIKPWKKALSQAANLAGWDMRNYRSDNDVMKEIVGEVLKRLDKTYLSITKFPVGLESRLQHDRGYVTEILNGCGLHADIGITVLVERSLIKVEKNNKLGIHHLLRDMGREIVRQSSPLPQRRSRLWLHNHVLDILTEHTRTPAGTEAIEGLALKLQRTSRVRFSAETFEEMKRLRLLQFDHVQLAGDYGHLSKHLRWVYWRGFSSKFIPDNFYQGNVVAIDMKHSNLKLVWKEPLHPLLEGLKFLNLSHSKFLSKTPNFSNLPNLERLILKDCPSLSEVHHSIGDLRNLLYLNLKDCTCLQNLPVIIYKLKSLKVLILSGCSKIDKLEEDIVQMESLTTLIAHNTSLKQVPFSIVRSKKIGYLSFCGYEGSARDIFPSIIWSWMTPTRGLVSSIQSFGSTSTSLVSVYIQDNNLSNLLSEVSEFPKLRSICVQCYSDLQLTQKLRIVDDFCNVNFAMETTYASQISESSMVSRLIGMGSYYQVMDMLNDSISEVPSISLYSQVFFMIQVMKTHSSSDFVLPGDNYPYWLAYTGEGYSVPFQVPDDSDCPMKGMTLCAICSSTPENMATESLASVFIFNYTKYTIQIYKQSTTMSSTDEDWAGIISNLGPGDNVEIFVCFGHGMTVEKTGVYLIFGQSVTRMEPSPEVSAPPSGDGSVLSSPEVEMEPSLNAQMEPSLNVQMELSKKPKKDIFSKSAKKMKACFCLS 845
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g01552 845 FunFam Disease resistance protein (TIR-NBS-LRR class) 18 182 - -
Spst4g01552 845 Gene3D - 16 188 IPR035897 -
Spst4g01552 845 Gene3D Ribonuclease Inhibitor 284 606 IPR032675 -
Spst4g01552 845 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 208 487 IPR044974 GO:0006952
Spst4g01552 845 Pfam TIR domain 23 188 IPR000157 GO:0007165
Spst4g01552 845 ProSiteProfiles TIR domain profile. 20 180 IPR000157 GO:0007165
Spst4g01552 845 SMART till_3 21 154 IPR000157 GO:0007165
Spst4g01552 845 SUPERFAMILY L domain-like 292 573 - -
Spst4g01552 845 MobiDBLite consensus disorder prediction 781 814 - -
Spst4g01552 845 SUPERFAMILY Toll/Interleukin receptor TIR domain 12 157 IPR035897 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g01552 Spst-Chr4 54542174 54547139 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst4g01552 201 493 WRKY Transcription Factor Family AT4G12020 33.548 1.69e-33 137
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g01552 - - aprc:113850721 855.129