Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Spst4g01544 | ATGGACGAGGATTTCGACATGCCGGCGGCGGAGCCCATGAACGACGACTTCGACTTTGGCGGCGGTGGCGACGACCTCGACAATCTCGACAACCCCGTCCTCAAGGTTGGCGAGGAGAAGGAGATTGGGAAACAGGGCTTGAAGAAGAAACTCCTCAAGGAAGGTCAAGGATGGGACACTCCTGAAGCTGGTGACGAAGTTCAAGTTCACTACACTGGGACGTTGCTTGATGGTACTAAGTTTGATTCCAGCAGAGATAGGGGAACTCCTTTCAGTTTCACGCTTGGACAAGGGCAAGTTATTAAAGGATGGGATCAAGGAATTATAACGATGAAGAAAGGTGAAAATGCCCTTTTCACCATCCCAGCTGAGCTAGCATATGGTGAATCTGGTTCTCCTCCAACTATTCCTCCCAATGCAACTCTTCAATTTGACGTGGAGCTGTTGTCTTGGACTAGTGTTAAGGACATATGTAAGGATGGAGGTTTATTTAAGAAGATAGTCGCTGAGGGGGATAAATGGGAGAACCCCAAGGATCTTGATGAAGTTTTAGTGAATTATGAAGCACGTCTTGAAGATGGGACTGTAGTAGCAAGATCTGATGGAGTGGAGTTCACAGTCAAAGATGGTTATTTTTGTCCTGCTTTGTCTAAGGCTGTTAAAACTATGAAGAAAGGAGAGAAAGTGATTCTGACTGTGAAGCCACAATATGGATTTGGTGAGAAAGGTAAGCCAGCACAAGGTGACGAAGGTGCAGTTCCACCAAATGCATCATTAGAGATTACTCTTGAGTTAGTTTCTTGGAAGACTGTGTCAGAAGTAACTAATGACAAGAAGGTTATTAAGAAGATCCTCAAAGAAGGGGAAGGATTTGAGCGTCCAAATGAGGGGGCAATTGTGAAATTGAAAGTAATTGGTAAGCTGCAAGATGGTACATTGTTTTTGAAGAAGGGTCATGATGATGAAGGGCAGCTGTTTGAATTCAAAACTGATGAGGAGCAAGTAATTGATGGGCTTGACAGAGCTGTGTTGACTATGAAGAAGGGTGAGGTGTCATTGTTAACTATTGCGCCTGAATATGCTTTTGGCTCATCCGAGTCTAAGCAGGAACTTGCAGTGGTTCCTCCCAACTCCACTTTGTATTATGAGGTTGAGCTAGTATCATTTGAGAAGGAGAAGGAGTCATGGGACATGAGCACACCAGAGAAGATTGAAGCTGCTGGTAAGAAGAAAGAAGAAGGAAATGCATTATTTAAAGCTGGTAAATATACAAGAGCTTCTAAAAGATATGAAAAGGCTGTAAAGTTCATAGAGTATGATACCTCCTTCAGTGAAGAAGAGAAGAAGAGCAGCAAGGCCTTGAAAGTTGCCTGTAATCTGAACGATGCAGCATGCAAGTTGAAGCTAAAAGATTACAAACAAGCAGAGAAATTGTGCACAAAGGTACTGGAACTTGAGAGCACTAACGTGAAGGCTCTCTATAGAAGGGCCCAGGCATATATTCAGTTGGCTGATTTAGACTTGGCTGAATTTGATATTAAGAAAGCTCTTGAGATTGACCCTGACAACAGGGAAGTCAAGCTTGAGTACAAGACCTTGAAGCAAAAGATGAAGGAATATAACAAAAAAGAGGCGCAGTTTTATGGAAATATTTTCAACAAACTGCATAAGCTAGATTCGCATGACAATAACAAAGCAGCGTCTACGGATGCCCAACCCATGAATATCGACAGCAAAGCATAA | 1743 | 0.4303 | MDEDFDMPAAEPMNDDFDFGGGGDDLDNLDNPVLKVGEEKEIGKQGLKKKLLKEGQGWDTPEAGDEVQVHYTGTLLDGTKFDSSRDRGTPFSFTLGQGQVIKGWDQGIITMKKGENALFTIPAELAYGESGSPPTIPPNATLQFDVELLSWTSVKDICKDGGLFKKIVAEGDKWENPKDLDEVLVNYEARLEDGTVVARSDGVEFTVKDGYFCPALSKAVKTMKKGEKVILTVKPQYGFGEKGKPAQGDEGAVPPNASLEITLELVSWKTVSEVTNDKKVIKKILKEGEGFERPNEGAIVKLKVIGKLQDGTLFLKKGHDDEGQLFEFKTDEEQVIDGLDRAVLTMKKGEVSLLTIAPEYAFGSSESKQELAVVPPNSTLYYEVELVSFEKEKESWDMSTPEKIEAAGKKKEEGNALFKAGKYTRASKRYEKAVKFIEYDTSFSEEEKKSSKALKVACNLNDAACKLKLKDYKQAEKLCTKVLELESTNVKALYRRAQAYIQLADLDLAEFDIKKALEIDPDNREVKLEYKTLKQKMKEYNKKEAQFYGNIFNKLHKLDSHDNNKAASTDAQPMNIDSKA | 580 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Spst4g01544 | 580 | SMART | tpr_5 | 490 | 523 | IPR019734 | GO:0005515 | |
Spst4g01544 | 580 | SMART | tpr_5 | 407 | 440 | IPR019734 | GO:0005515 | |
Spst4g01544 | 580 | SMART | tpr_5 | 456 | 489 | IPR019734 | GO:0005515 | |
Spst4g01544 | 580 | Coils | Coil | 523 | 543 | - | - | |
Spst4g01544 | 580 | Gene3D | - | 270 | 391 | IPR046357 | GO:0003755 | |
Spst4g01544 | 580 | ProSiteProfiles | TPR repeat profile. | 490 | 523 | IPR019734 | GO:0005515 | |
Spst4g01544 | 580 | FunFam | Peptidylprolyl isomerase | 37 | 155 | - | - | |
Spst4g01544 | 580 | ProSiteProfiles | FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. | 180 | 269 | IPR001179 | GO:0003755 | |
Spst4g01544 | 580 | ProSiteProfiles | FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. | 297 | 390 | IPR001179 | GO:0003755 | |
Spst4g01544 | 580 | ProSiteProfiles | FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. | 64 | 152 | IPR001179 | GO:0003755 | |
Spst4g01544 | 580 | SUPERFAMILY | FKBP-like | 40 | 166 | - | - | |
Spst4g01544 | 580 | SUPERFAMILY | FKBP-like | 273 | 407 | - | - | |
Spst4g01544 | 580 | Gene3D | - | 37 | 155 | IPR046357 | GO:0003755 | |
Spst4g01544 | 580 | Pfam | Tetratricopeptide repeat | 490 | 523 | IPR001440 | GO:0005515 | |
Spst4g01544 | 580 | Pfam | FKBP-type peptidyl-prolyl cis-trans isomerase | 293 | 387 | IPR001179 | GO:0003755 | |
Spst4g01544 | 580 | Pfam | FKBP-type peptidyl-prolyl cis-trans isomerase | 175 | 266 | IPR001179 | GO:0003755 | |
Spst4g01544 | 580 | Pfam | FKBP-type peptidyl-prolyl cis-trans isomerase | 60 | 149 | IPR001179 | GO:0003755 | |
Spst4g01544 | 580 | FunFam | Peptidylprolyl isomerase | 395 | 550 | - | - | |
Spst4g01544 | 580 | MobiDBLite | consensus disorder prediction | 1 | 31 | - | - | |
Spst4g01544 | 580 | FunFam | Peptidylprolyl isomerase | 156 | 269 | - | - | |
Spst4g01544 | 580 | SUPERFAMILY | TPR-like | 396 | 554 | IPR011990 | GO:0005515 | |
Spst4g01544 | 580 | Gene3D | Tetratricopeptide repeat domain | 393 | 550 | IPR011990 | GO:0005515 | |
Spst4g01544 | 580 | FunFam | Peptidylprolyl isomerase | 270 | 392 | - | - | |
Spst4g01544 | 580 | Gene3D | - | 156 | 269 | IPR046357 | GO:0003755 | |
Spst4g01544 | 580 | PANTHER | PEPTIDYLPROLYL ISOMERASE | 39 | 153 | - | - | |
Spst4g01544 | 580 | SUPERFAMILY | FKBP-like | 156 | 271 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Spst4g01544 | Spst-Chr4 | 54451053 | 54456452 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Spst4g01544 | 34 | 564 | Calmodulin-binding Proteins | AT3G25230 | 82.486 | 0.0 | 892 |