Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g01543 ATGCTATATAACACCAACACCTACTCAGTCTCTGTGTCTCCGAGTGAGAAAGAGAAAAACAAATCAGTGACCGATTTTAGGCACGAAAAAGAAAGAAAAATGAGTTTCCGTTCTTCCATGAACGCCGTTCCCCTTCTTCTCTTCGTCCTTTTCGTTTCCGCATTAGTTTGTGCGAAGAAGACGGCTGATGTGACGGAGTTGCAGATTGGCGTGAAGCATAAACCAGCATCATGTGAAGTTCAGGCACACAAAGGCGATAGAGTCAAAGTACACTACCGGGGAAAACTCACTGATGGAACTGTTTTCGATTCTAGCTTTGAAAGAAATAATCCCATTGAATTTGAGCTTGGTAGTGGTCAAGTGATCAAAGGGTGGGACCAGGGATTATTGGGAATGTGTCTTGGGGAGAAGAGGAAGCTGAAAATACCATCAAAACTGGGCTATGGAGATCAGGGTTCCCCACCAACTATTCCAGGTGGTGCAACACTGGTATTTGACACTGAGCTTGTGGGAGTGAACGGCAAAAGTTTAGGCGAAGAAAAGCAAGGCTCCGAACTGTAG 561 0.451 MLYNTNTYSVSVSPSEKEKNKSVTDFRHEKERKMSFRSSMNAVPLLLFVLFVSALVCAKKTADVTELQIGVKHKPASCEVQAHKGDRVKVHYRGKLTDGTVFDSSFERNNPIEFELGSGQVIKGWDQGLLGMCLGEKRKLKIPSKLGYGDQGSPPTIPGGATLVFDTELVGVNGKSLGEEKQGSEL 186
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g01543 186 PANTHER PEPTIDYLPROLYL ISOMERASE 45 175 IPR044609 GO:0000413|GO:0003755|GO:0061077
Spst4g01543 186 MobiDBLite consensus disorder prediction 1 26 - -
Spst4g01543 186 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 85 173 IPR001179 GO:0003755
Spst4g01543 186 MobiDBLite consensus disorder prediction 1 17 - -
Spst4g01543 186 Gene3D - 53 173 IPR046357 GO:0003755
Spst4g01543 186 FunFam Peptidylprolyl isomerase 53 173 - -
Spst4g01543 186 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 79 170 IPR001179 GO:0003755
Spst4g01543 186 SUPERFAMILY FKBP-like 44 175 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g01543 Spst-Chr4 54438628 54442197 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst4g01543 60 170 Calmodulin-binding Proteins AT3G25230 50.000 2.00e-28 108
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g01543 K09569 - gmx:100305479 272.707
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst1g03706 1 46873892 46877997 Spst4g01543 4 54438628 54442197 PCT