Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g01527 ATGGATCCTGATTCCTATGTCCAAACTATTGCAGGAATCTTAGCTCTGTTAATTGCATACACTGTGTTGAGGTCCATTAAATTCCCTGATGGATCTAAAAAACTGATCAAGGGTAACAAACTACCTGAACCACCTTTTGCTTTACCTTTCATAGGTCACCTCCATCTTCTGAATGCTAGAGTACCCTATTTCAGGACCTTTTCAGCCATGGCTGAGAAATATGGTCCAATTTTCTCTGTCAATTTGGGTTGCCACCCCACCGTAGTGGTGAACAGCAGGGAAATCGCCAAGGAGTGCCTCACAACCAATGACAAAGTTCTTGCCTCAAGGCCTAACACTTCTGCAGGGAGACTCTTAGGTTACAACAATGCAGTTTTTGGCCTTGCCCCTTATGGAAATTATTGGCGTGAGATTAGAAAAATGGCCGTTCTTGAGATTTTCTCAAGCTACAGGCTTGAGAAGTTAAAGCATGTGAGAGACACTGAAACACTGTCTCTTGTGAAGGACATGTACTCGTCAATATCATCTGCAATGAACGTGAAGGGTTCAACTGAGGTGGCTATGAGCAATCTATTGGAGCACATGACGTTCAATATAATTGTGAGGATGATAGCTGGGAAGAGATTTGGAGGGGACACAGTAAATGAAGAAGAAAATGAGGCATGGAAGCTGAGGAAAGCCATAAAAGATGCCACATATCTATCTGGTGTTTTTGTGGTGGCTGATGCAATTCCATCCCTTAGATGGTTTGATTTTCAAGGGCATTTGAGTTTCATGAAGAGGACAGCTAAGACACTTGACCTTATCCTTAAGAGGTGGCTGGAAGAACACGTGAAAATGAGAGGGGAGCAGAGAAACGGTGGATGTGAGAGGGACTTCATGGATGTGATGCTATCAGCCTTCGAAGAGCAAGAAGATATTTGTGGCCACGAGAGGGAGATAGTTATCAAAGCAACATCGTTGCTTCTTGTCCTTACTGGTTCTGGAAGCACAGCCATAACCCTAACATGGGCACTCTCCTTACTCCTAAACCACCCCAAGGTCCTAAAGGCAGCACAACAAGAATTGGACACCCAGGTGGGAAAAGAAAGATGGGTGCAAGAATCTGACATAGAAAACCTCACTTATCTCCATGCCATTATCAAAGAGACCCTTCGTCTGTACCCACCAGCACCCTTAACAGGAATCAGGGAAGCCATGGAGGATTGTTGTGTGGCAGGGTATCATGTCCCGAAGGGAGCACGTTTGCTTATTAACCTATGGAAGTTGCAGAGGGACCCACAAGTATGGTCCAACCCTAATGAGTTTAACCCAGACAGGTTCCTCACAACCCATCAAGACGTTGACTTTATGAGCCCGAACTTCCAGTTGATTCCATTCAGCTTTGGAAGAAGGTCCTGCCCTGGCTTGACATTTGGGCTACAAGTGTTGCACTTGACCCTGGCTCGGTTGCTTCAAGGGTTTGATATGTGCGTGAAGGATGGTGCTGAAGTTGATATGACTGAAGGGTTAGGAGTGGCCTTGCCTAAGGAAAACGATCTCCAAATTATGCTTGAACCACGTCTTCCATTGGAGCTTTATGAAAACCTTTGA 1593 0.4513 MDPDSYVQTIAGILALLIAYTVLRSIKFPDGSKKLIKGNKLPEPPFALPFIGHLHLLNARVPYFRTFSAMAEKYGPIFSVNLGCHPTVVVNSREIAKECLTTNDKVLASRPNTSAGRLLGYNNAVFGLAPYGNYWREIRKMAVLEIFSSYRLEKLKHVRDTETLSLVKDMYSSISSAMNVKGSTEVAMSNLLEHMTFNIIVRMIAGKRFGGDTVNEEENEAWKLRKAIKDATYLSGVFVVADAIPSLRWFDFQGHLSFMKRTAKTLDLILKRWLEEHVKMRGEQRNGGCERDFMDVMLSAFEEQEDICGHEREIVIKATSLLLVLTGSGSTAITLTWALSLLLNHPKVLKAAQQELDTQVGKERWVQESDIENLTYLHAIIKETLRLYPPAPLTGIREAMEDCCVAGYHVPKGARLLINLWKLQRDPQVWSNPNEFNPDRFLTTHQDVDFMSPNFQLIPFSFGRRSCPGLTFGLQVLHLTLARLLQGFDMCVKDGAEVDMTEGLGVALPKENDLQIMLEPRLPLELYENL 530
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g01527 530 SUPERFAMILY Cytochrome P450 44 521 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst4g01527 530 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 460 469 IPR017972 GO:0005506|GO:0016705
Spst4g01527 530 FunFam Cytochrome P450 82C4 32 519 - -
Spst4g01527 530 PRINTS P450 superfamily signature 458 467 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst4g01527 530 PRINTS P450 superfamily signature 379 390 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst4g01527 530 PRINTS P450 superfamily signature 326 343 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst4g01527 530 CDD CYP82 75 521 - -
Spst4g01527 530 Gene3D Cytochrome P450 36 524 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst4g01527 530 Pfam Cytochrome P450 42 512 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst4g01527 530 PANTHER CYTOCHROME P450 82C3-RELATED 26 527 - -
Spst4g01527 530 PRINTS E-class P450 group I signature 71 90 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst4g01527 530 PRINTS E-class P450 group I signature 457 467 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst4g01527 530 PRINTS E-class P450 group I signature 467 490 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst4g01527 530 PRINTS E-class P450 group I signature 335 361 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst4g01527 530 PRINTS E-class P450 group I signature 95 116 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst4g01527 530 PRINTS E-class P450 group I signature 419 443 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst4g01527 530 PRINTS E-class P450 group I signature 195 213 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst4g01527 530 PRINTS E-class P450 group I signature 378 396 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g01527 Spst-Chr4 54202442 54204905 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst4g01527 42 527 Cytochrome P450 AT4G31970 50.000 2.87e-167 482
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g01527 K17961 - gmx:100806378 880.552