Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g01526 ATGGATCCTGCTTCGTATGTCCAAGCTCTTATTGCAGGAATCCTAGCTTTGCTAAGTGCATACAATGTGTTTAGGTTCATTAGATCTCCTAATGGTTCTAAACAAAGAAAGGGCAAAGTACCCGAACCTTGTGGTGCTTTACCTTTCATAGGTCACCTCCATCTTCTCAATGCTAGAGTACCCTATTTCAGGACCTTTTCAGCCATGGCTGAGAAATATGGTCCAATTTTCTCTGTCAAACTGGGTTGTCACCCCACCATAGTGGTGAACAGCAGGGAAATTGCCAAGGAGTGCCTCACAACCAATGACAAAGTTTTTGCCTCAAGGCCAAACACTTCTGCAGGGAGACTCTTAGGTTACAACAATGCAATATTTGGCCTTTCCCCTTATGGAGATTATTGGCGTGAGATTAGGAAAATGGCCGTTCTTGAGATTTTCTCAAGCTACAGGCTTGAGAAATTAAAGCATGTGAGAGACACTGAAACATTGTCTCTTGTCAAGGACTTGTACTCGACAATATCATCTGCAAAGAACCTGAAGGGTTCAACTGAAGTGGCTATTAGCAATCTATTGGAGCACATGACATTCAACATAATTGTGAGGATGATAGCTGGGAAGAGATTTGGAGGGGACGCAGTTGATGCAGAAGACAATGACGCATGGAAGCTGAGGAAAGCCATAAAAGATGCCACATATTTGTTTGGTGTTTTTGTGGTGGCTGATGCAATTCCATCCCTTGGTTGGTTTGATTTCCAAGGGCACGTGAGTTTCATGAAAAGAACAGCAAAGCAAACTGATCTCATCCTTGAGAAGTGGCTGGAAGAACATGTAAGAAAGAGAGTGAGAGACGGAGACAGTGAAAGGGACTTCATGGATGTCATGATATCAAGTTTTGAAGGGCAAGATGAGATTTGTGGCTATAAGAGGGAGACTGTCATCAAAGCAACTGCAATGATGCTTATCCTTACTGGTTCAGGAAGCACAGCGATGACCCTAACATGGGCACTGTCGTTGCTCCTAAACCACACAAAGGTTCTAAAGGCAGCACAACAAGAATTGGACACCCAGGTGGGAAAAGAAAGATGGGTGCAAGAATGTGACATAAAAAACCTCACTTATCTCCATGCCATTATCAAAGAGACCCTTCGTTTGTACCCACCAGCACCCTTAACAGGAATTAGGGAGGTGATGGAAGATTGTTGTTTAGTAGGGTACCATGTCCCAAAGGGAACACGGTTGCTTATTAACTTATGGAACTTGCAAAGGGACCCACAAGTATGGGCCAACCCTAATGAGTTTCAGCCAGAGAGGTTCCTCACCACGCATGGAGACATTGATTTTATGAGCAAGGACTTTGAGTTAATTCCATTTAGCATTGGAAGAAGGTCGTGCCCTGGCATGGCCTTTGGGCTACAAGTGACGCACTTGACCTTGGCTAGGTTGCTTCAAGGGTTTGATATGAGCACAAAAGATGGTGTTGAGGTTGATATGACTGAAGGGTTAGGAGTGGCCTTGCCTAAGGAACATGCACTTCGAGTTATGCTCCATCCACGTCTTCCATTGGAGCTTTATGAAAACCTTTGA 1584 0.4419 MDPASYVQALIAGILALLSAYNVFRFIRSPNGSKQRKGKVPEPCGALPFIGHLHLLNARVPYFRTFSAMAEKYGPIFSVKLGCHPTIVVNSREIAKECLTTNDKVFASRPNTSAGRLLGYNNAIFGLSPYGDYWREIRKMAVLEIFSSYRLEKLKHVRDTETLSLVKDLYSTISSAKNLKGSTEVAISNLLEHMTFNIIVRMIAGKRFGGDAVDAEDNDAWKLRKAIKDATYLFGVFVVADAIPSLGWFDFQGHVSFMKRTAKQTDLILEKWLEEHVRKRVRDGDSERDFMDVMISSFEGQDEICGYKRETVIKATAMMLILTGSGSTAMTLTWALSLLLNHTKVLKAAQQELDTQVGKERWVQECDIKNLTYLHAIIKETLRLYPPAPLTGIREVMEDCCLVGYHVPKGTRLLINLWNLQRDPQVWANPNEFQPERFLTTHGDIDFMSKDFELIPFSIGRRSCPGMAFGLQVTHLTLARLLQGFDMSTKDGVEVDMTEGLGVALPKEHALRVMLHPRLPLELYENL 527
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g01526 527 PRINTS P450 superfamily signature 323 340 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst4g01526 527 PRINTS P450 superfamily signature 376 387 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst4g01526 527 PRINTS P450 superfamily signature 455 464 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst4g01526 527 PRINTS E-class P450 group I signature 70 89 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst4g01526 527 PRINTS E-class P450 group I signature 375 393 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst4g01526 527 PRINTS E-class P450 group I signature 454 464 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst4g01526 527 PRINTS E-class P450 group I signature 194 212 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst4g01526 527 PRINTS E-class P450 group I signature 94 115 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst4g01526 527 PRINTS E-class P450 group I signature 464 487 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst4g01526 527 PRINTS E-class P450 group I signature 332 358 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst4g01526 527 PRINTS E-class P450 group I signature 416 440 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst4g01526 527 PANTHER CYTOCHROME P450 82C3-RELATED 17 524 - -
Spst4g01526 527 Gene3D Cytochrome P450 27 518 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst4g01526 527 CDD CYP82 74 518 - -
Spst4g01526 527 Pfam Cytochrome P450 42 508 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst4g01526 527 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 457 466 IPR017972 GO:0005506|GO:0016705
Spst4g01526 527 SUPERFAMILY Cytochrome P450 41 518 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst4g01526 527 FunFam Cytochrome P450 82C4 30 516 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g01526 Spst-Chr4 54181725 54183761 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst4g01526 41 524 Cytochrome P450 AT4G31940 49.797 7.23e-168 484
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g01526 K17961 - gmx:100806378 872.848