Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g01525 ATGCCACTCATGACTCATCTAATCTTATCTTCAATCTTTCACAAGTTCAAATCCCACGCCATGGATTTCCTTTCACAACCAACACTTGTAGTGGTAGCCATAATAACCATAGTTCTTCTTTACAAAACATGGAGGAAGAAAAAAGGTAGTCACAAAAGCAAGGGTCAACAACCCCCAGAACCCTCAGGTGCCCTACCTCTGATTGGTCACCTCCACCTGCTAGGAGCTCAAACACCCCTTGCTAGGAGCTTTGCTGCTTTGGCTGACAAATACGGCTCCATCTTCCAAATCCGTCTAGGGGCATACCCTGCTCTTGTGATTTGCAACCGAGAGGCAATAAAAGAGTGTTTCACCACCAACGACAAAGTCTTGGCCTCACGCCCTAAGTCAAGCCATGGTGTGCACCTTGGTTACAATTTTGCAGGGTTTGGATTTGCCCCTTATGGCACATATTGGATCAAGATCAGAAAGCTCACCATGCTTGAATTGCTCTCTGCTCGCCGCCTTGAATTCTTGAGGCATGTTTATGAATCTGAGATTGATACTTTGGTGAAGGATCTTCGGATGTATCTGGGAAGCAAAACTGGCGTTAAGGTCACAATCAGTGAGTGGTTGGAACGGTTGACCTTCAATATGATCACAAAGATGATTGCTGGGAAAAGGTATTTCAGTTATTTGGAAGATGTGGATGATGTTGAAGCACATGGTATTGTGAAACTCATAAAGGAGTTCATGCATATATCTGGGGAGTTTGTGACTTCGGATTTGATTCCAGTTCTTGGATGGTTTGGTCTGCATGGGCAAGTGCTGAAATCTATGAAACGAATTGCAAAAGATTTGGACACCCTTGTGGGAGGTTGGGTTGAAGAGCACAAGAAGAGTGATCCACTCTCCAACAAATCATGGGAAAACCATGATTTCATTGATGTCATGCTCTCTGTTATTGAAGATGATCCTGTCTCTGGTCATAACCGTGATACCATCATCAAAGCTACTGTTATGAATATTATGTTAGCAGGGTCAGACACAACATCGACGACAATGACATGGATACTAGCCATGTTGATGAAGAATCCACACGCTTTGAAGCGAGCACAAGAAGAGGTTGATCATCATGTGGGTAGGGAGAGAAGGGTGGAAGCAAATGACCTAAAAAATCTCGTTTATCTGCAAGCAATTATGAAGGAAACTTTGAGGCTATACCCTCCAGGGCCTCTGTTGGTACCCCACGAGGCTAGAGAAGATTGCAGGATTCAGGGCTATCATGTACCAAAAGGGACACGTGTGTTTGCCAACGTGTGGAAACTTCACAGAGATCCAAGTGTTTGGTGTGAGCCTGAGAAGTTTTCACCTGAGAGGTTTATGAATGAGAATGGAGAAGTTGATGAAGGTCACCATTTTGAGTATTTGCCCTTTGGGTCAGGGAGAAGAGCTTGCCCTGGTTCCACTTTTGCCACACAAGTGAGTCTCATGACACTTGCTCGTTTGCTTCAAGGGTTTGATTTGGAGGTGCCTGTGGATGAACCTGTTGATTTAGAAGAAGGGTTGGGCATCACCTTGCCCAAGATGAATCCATTACAAATTCTCTTGAGCTCCAGGTTACCTAATCAATTTTACAACTCATAG 1626 0.4428 MPLMTHLILSSIFHKFKSHAMDFLSQPTLVVVAIITIVLLYKTWRKKKGSHKSKGQQPPEPSGALPLIGHLHLLGAQTPLARSFAALADKYGSIFQIRLGAYPALVICNREAIKECFTTNDKVLASRPKSSHGVHLGYNFAGFGFAPYGTYWIKIRKLTMLELLSARRLEFLRHVYESEIDTLVKDLRMYLGSKTGVKVTISEWLERLTFNMITKMIAGKRYFSYLEDVDDVEAHGIVKLIKEFMHISGEFVTSDLIPVLGWFGLHGQVLKSMKRIAKDLDTLVGGWVEEHKKSDPLSNKSWENHDFIDVMLSVIEDDPVSGHNRDTIIKATVMNIMLAGSDTTSTTMTWILAMLMKNPHALKRAQEEVDHHVGRERRVEANDLKNLVYLQAIMKETLRLYPPGPLLVPHEAREDCRIQGYHVPKGTRVFANVWKLHRDPSVWCEPEKFSPERFMNENGEVDEGHHFEYLPFGSGRRACPGSTFATQVSLMTLARLLQGFDLEVPVDEPVDLEEGLGITLPKMNPLQILLSSRLPNQFYNS 541
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g01525 541 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 472 481 IPR017972 GO:0005506|GO:0016705
Spst4g01525 541 Gene3D Cytochrome P450 47 538 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst4g01525 541 Pfam Cytochrome P450 58 522 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst4g01525 541 FunFam Cytochrome P450 82C4 48 531 - -
Spst4g01525 541 PRINTS P450 superfamily signature 339 356 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst4g01525 541 PRINTS P450 superfamily signature 392 403 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst4g01525 541 PRINTS P450 superfamily signature 470 479 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst4g01525 541 PANTHER CYTOCHROME P450 82C3-RELATED 34 539 - -
Spst4g01525 541 PRINTS E-class P450 group I signature 391 409 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst4g01525 541 PRINTS E-class P450 group I signature 479 502 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst4g01525 541 PRINTS E-class P450 group I signature 469 479 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst4g01525 541 PRINTS E-class P450 group I signature 208 226 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst4g01525 541 PRINTS E-class P450 group I signature 348 374 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst4g01525 541 PRINTS E-class P450 group I signature 432 456 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst4g01525 541 PRINTS E-class P450 group I signature 112 133 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst4g01525 541 PRINTS E-class P450 group I signature 328 345 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst4g01525 541 PRINTS E-class P450 group I signature 88 107 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst4g01525 541 SUPERFAMILY Cytochrome P450 58 533 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst4g01525 541 CDD CYP82 92 533 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g01525 Spst-Chr4 54156310 54158156 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst4g01525 59 539 Cytochrome P450 AT4G31940 47.967 4.20e-164 474
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g01525 - - gmx:100790675 888.641