Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g01506 ATGTGCAAGAGAGTGTTGAGTGATGATGAGAAGTTCAAGCAAGGGTATCCAAAATCCACGACTGAGTTGTTGAGAAACAAGGCTTTGACTCATGTGTGCAGTGCTGAACACAAGGGTTTACGAGAGTTGGTCACTTCTCGAGTTTTGGGTCAGAATGTGTTGGCAATGTACCTGGAACGTGTGGAGAAGATAGTGATTAATTCGTTGGAAGAGTTATCCAGCATGAAGCACCCTGTTCAGCTATTCAAAGAGATGGAGAAGGTTTCCTTTGACATCATTGCTCACATCTTCATGGGTTCTCACAGTCTCTCCAACATCGCCAAGTTGAGAGACTTGTTTCACCAATTCTGCATATGTAGTCCCATGTATTCTATTGCCATTAACTTGCCTGGTTTTGCTTTCCATAAAGGACTCAAGATACGAAAGAAGTTGAAGAAGCTAATTGTATCCGTAGTGGGTGAAAGGAGGCTAATGATGAAAACTGGAGAAGTTGGGGATAAGAAGGATCTTATTGACCTTGTTTTGGAAGGGAAAGGGGAGAATGGTGAGGAATTGAAGGAGGAAGATGTTGCAGACATGTTGATAATGCTTCTGTTTGCTGGTCATGAAACCACAGCAGTGGGTTTGACATCCACAATTTTATATCTTACACGACATCCACAAGTTTTTACAAAAGCCAAGGAAGAACAAGAAGCAATTGTGAAGCGAAGACCATCATCTCAGAAACATTTAAGTCATAAGGACATTAAGCAGATGGTTTATCTTTCTCAGGTAATTAATGAAATGTTACGCCGTACCAATATTGCCTTTACACTTTTCCGTGAGGCTACAACTGAAGTTAATATCAATGATTATATCATACCCAAAGGATGGAGAGTTCTAGTTTGGACAAGAGCTGTTCATATGAATCCTGAATACTATCCAAATCCAGATGCATTTGATCCATCAAGATGGGATGACTACAATCCTAAGACAGGAACATTCCTTCCTTTTGGAGCAGGAACTAGGTTTTGTCCAGGAAATCACATATTCAAATTCGAAATTTCTATATTTTTACATTATTTTCTCCTAAATTACAAGTTGAAGCAAATAAATCCAGAAAGTCCTGAATCTATCTTCCCATTCTCCTACCCAAAAGTCTTAGCTAAGGTCATAAAGGTCTCTAGCTTAAGTAATTGA 1179 0.3936 MCKRVLSDDEKFKQGYPKSTTELLRNKALTHVCSAEHKGLRELVTSRVLGQNVLAMYLERVEKIVINSLEELSSMKHPVQLFKEMEKVSFDIIAHIFMGSHSLSNIAKLRDLFHQFCICSPMYSIAINLPGFAFHKGLKIRKKLKKLIVSVVGERRLMMKTGEVGDKKDLIDLVLEGKGENGEELKEEDVADMLIMLLFAGHETTAVGLTSTILYLTRHPQVFTKAKEEQEAIVKRRPSSQKHLSHKDIKQMVYLSQVINEMLRRTNIAFTLFREATTEVNINDYIIPKGWRVLVWTRAVHMNPEYYPNPDAFDPSRWDDYNPKTGTFLPFGAGTRFCPGNHIFKFEISIFLHYFLLNYKLKQINPESPESIFPFSYPKVLAKVIKVSSLSN 392
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g01506 392 PANTHER CYTOCHROME P450 26 2 374 - -
Spst4g01506 392 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 331 340 IPR017972 GO:0005506|GO:0016705
Spst4g01506 392 Pfam Cytochrome P450 2 375 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst4g01506 392 SUPERFAMILY Cytochrome P450 2 368 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst4g01506 392 PRINTS P450 superfamily signature 329 338 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst4g01506 392 PRINTS P450 superfamily signature 257 268 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst4g01506 392 PRINTS P450 superfamily signature 200 217 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst4g01506 392 PRINTS P450 superfamily signature 338 349 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst4g01506 392 Gene3D Cytochrome P450 2 383 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst4g01506 392 PRINTS E-class P450 group I signature 189 206 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst4g01506 392 PRINTS E-class P450 group I signature 209 235 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst4g01506 392 PRINTS E-class P450 group I signature 328 338 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst4g01506 392 PRINTS E-class P450 group I signature 296 320 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst4g01506 392 PRINTS E-class P450 group I signature 338 361 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g01506 Spst-Chr4 53894829 53897701 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst4g01506 2 387 Cytochrome P450 AT2G32440 43.702 1.35e-111 333
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g01506 K04123 - vra:106773832 564.303