Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g01486 ATGGACTTGAGGGATGCAAGGGTTGGCTTCTTTCTGTTTTTTAGCTTCTTGCTTGTCACTTTCTCTGAACAAGATGGTTTCTTGAGTCTTTCTTGTGGTGGAAGAACCAGTTTCAGGGATTCATCTAACATTTCATGGGTACCAGACAACACCTATGTAACCACAGGCAAGACTACCACCATCATTTATAGTGATGGTTCCTCCTCATTGAACATCTCAGCTCGGTTCTTCCCAAATTCCGGAAGGCGAAAATGTTACAGAATACCAGCAAACAATTCAACGACTTTGGTTCTTGTTAGAGCAAAATTTGTGTACAAGAACTATGATGGACTTGGGAAACCCCCTAAGTTCTCTGTTTCAATTGGGACAGCTATTGCTGCCACCATAAATCTTGCTGAAGAAGATCCATGGAGTGAAGAGTTTCTATGGACAGTCAACATAGATACACTGCCATTCTGCTTAATTGCAATGCCTAAAGGAGGTTCACCTGTAATTTCTTCTCTTGAAATCAGACCACTTCCTCAGGGAGCCTACACAAATGGCATGACAGATTTTCCTAACAAATTGCTTAGGAAGAGTTATAGAATTGATTGTGGACACTCAAATGATTCTATAAGGTATCCCTTGGATCCATTTGATAGAATATGGGATGCTGATAGAAGTTTCACACCCTTTCATGTTGCCACTGGGTTTAAGATTCAACTTAGCTTCAGGCAGTCTAGTCTTGTGGAAGAACCACCAGCAGCTGTTCTTCAAACTGGGAGAGTTTTGGCTCGAAGAAATACTCTGACATACAACCTCCCTCTTGATGCATTAGGGGACTACTACATCATCCTCTACTTTGCAGGAATTCTTCCTGTCTTCCCGTCATTTGATGTCCTTATAAATGGAGAACTAGTAAAATCAAACTACACAATAAATAGCTCTGAAACCAGTGCTTTATACTTGACACGAAAGGGAATTGAGAGCTTGAATATAACATTAAAGAGTATCAGCTTTTACCCTCAAATCAATGCATTTGAGGTTTATAAGATAGTTGATATTCCAACTGATGCCTCCTCAACCACAGTTTCAGCACTGCAGGTTATTCAGCAGTCCACTGGATTTGATCTTGGATGGCAGGATGATCCATGTCTGCCTTCCCCGTGGGAGAAAATTGACTGTGAAGGAAGCCTTGTTACATCATTGGATCTTTCAGACATAAATTTGAGATCCATTAGTCCTACATTTGGTGACTTGTTAGACCTCAAAAAATTGGATTTGCACAACACATCACTTACTGGTGAAATACAGAATTTGGATGGCTTGCAGCATCTTGAGAAACTGAACCTGAGTTTCAATCAACTAACATCTATTGGTGCAGATCTGGAGAACTTGATTAACCTTCAAATATTAGACTTGCAGAACAATAGTCTAATGGGAGTAGTGCCTGATGGCTTGGGAGAGTTAGAGGACCTCCACTTATTAAATCTGGAAAACAACAAACTACAAGGTCCTCTGCCACAGTCTTTGAACAAAGAAACATTAGAGATCAGGACATCTGGTAATTTGTGTCTTACCTTTTCCACAACATCATGTGATGATGCATCATCCAGTCCTCCAATTGAGGCACCACAAGTTACTGTAGTTCCTCAGAAGGAGCACAATGTACATAAACATCTAGCAATCATTCTAGGCATGGTTGGAGGAGTCATACTAGCCTTTCTCTTAGTGTGTATTTCAGTATTGATATACAAGACCAAACAGCAATATGAAGCCTCCCACACATCAAGAGGAGAAATGGATATGAGGAACTGGGGAGCTGCAAAAGTCTATTCCTACAAGGAAATCAAAGTAGCTACAAGAAATTTCAAAGAAGTAATAGGAAGGGGTAGTTTTGGATCTGTTTATCTTGGAAAACTTCCAGATGGAAAGTCTGTAGCTGTCAAAGTTCGATTTGACAAATCTCAACTGGGTGCTGATTCTTTCATCAATGAGGTTAATCTATTGTCAAAAATCCGGCATCAAAATCTTGTGTCTTTGGAAGGATTTTGTCATGAAAGAAAGCATCAGATATTGGTTTATGAGTACTTGCCTGGTGGATCCCTGGCTGATCACCTCTATGGTACAAACAGTCAAAAAACTTCCTTAAGCTGGGTGCGAAGGTTGAAAATTGCTGTTGATGCAGCAAAAGGATTGGAGTATTTGCACAATGGAAGTGAACCACGAATCATACACCGTGATGTGAAGTGCAGTAACATCCTCTTGGATATGGATATGAATGGCAAGGTCTGTGACTTGGGTCTCTCTAAGCAAGTAACTCAGCCTGATGCAACTCATGTCACCACTGTTGTCAAGGGAACTGCTGGTTACCTCGATCCAGAGTACTATTCCACTCAACAGTTGACAGAAAAAAGTGATGTATATAGCTTTGGAGTTGTTCTTTTGGAACTCATTTGTGGAAGAGAGCCATTGACTCACTCTGGAACTCCTGACTCGTTCAACTTGGTGTTATGGGCCAAGCCATACTTGCAAGCTGGTGCATTTGAGATTGTGGATGAGGACATAAGAGGAAGTTTTGATCCCTTGAGTATGAGGAAGGCAGCTTTCATTGCCATAAAGTCAGTGGAGAGGGATGCATCACTGAGGCCTTCTATTGCTGAGGTATTGGCAGACCTAAATGAAGCCTACAATATTCAGCTCAGATTCCTTGAATCTTCTCAGAATGAGATTTGA 2715 0.4096 MDLRDARVGFFLFFSFLLVTFSEQDGFLSLSCGGRTSFRDSSNISWVPDNTYVTTGKTTTIIYSDGSSSLNISARFFPNSGRRKCYRIPANNSTTLVLVRAKFVYKNYDGLGKPPKFSVSIGTAIAATINLAEEDPWSEEFLWTVNIDTLPFCLIAMPKGGSPVISSLEIRPLPQGAYTNGMTDFPNKLLRKSYRIDCGHSNDSIRYPLDPFDRIWDADRSFTPFHVATGFKIQLSFRQSSLVEEPPAAVLQTGRVLARRNTLTYNLPLDALGDYYIILYFAGILPVFPSFDVLINGELVKSNYTINSSETSALYLTRKGIESLNITLKSISFYPQINAFEVYKIVDIPTDASSTTVSALQVIQQSTGFDLGWQDDPCLPSPWEKIDCEGSLVTSLDLSDINLRSISPTFGDLLDLKKLDLHNTSLTGEIQNLDGLQHLEKLNLSFNQLTSIGADLENLINLQILDLQNNSLMGVVPDGLGELEDLHLLNLENNKLQGPLPQSLNKETLEIRTSGNLCLTFSTTSCDDASSSPPIEAPQVTVVPQKEHNVHKHLAIILGMVGGVILAFLLVCISVLIYKTKQQYEASHTSRGEMDMRNWGAAKVYSYKEIKVATRNFKEVIGRGSFGSVYLGKLPDGKSVAVKVRFDKSQLGADSFINEVNLLSKIRHQNLVSLEGFCHERKHQILVYEYLPGGSLADHLYGTNSQKTSLSWVRRLKIAVDAAKGLEYLHNGSEPRIIHRDVKCSNILLDMDMNGKVCDLGLSKQVTQPDATHVTTVVKGTAGYLDPEYYSTQQLTEKSDVYSFGVVLLELICGREPLTHSGTPDSFNLVLWAKPYLQAGAFEIVDEDIRGSFDPLSMRKAAFIAIKSVERDASLRPSIAEVLADLNEAYNIQLRFLESSQNEI 904
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g01486 904 ProSiteProfiles Leucine-rich repeat profile. 438 460 IPR001611 GO:0005515
Spst4g01486 904 ProSiteProfiles Protein kinase domain profile. 615 890 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst4g01486 904 SUPERFAMILY L domain-like 359 506 - -
Spst4g01486 904 Pfam Malectin-like domain 30 345 IPR024788 -
Spst4g01486 904 ProSitePatterns Serine/Threonine protein kinases active-site signature. 737 749 IPR008271 GO:0004672|GO:0006468
Spst4g01486 904 ProSitePatterns Protein kinases ATP-binding region signature. 621 643 IPR017441 GO:0005524
Spst4g01486 904 PANTHER OS07G0107800 PROTEIN-RELATED 451 890 - -
Spst4g01486 904 CDD STKc_IRAK 621 888 - -
Spst4g01486 904 Pfam Protein kinase domain 617 883 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst4g01486 904 FunFam LRR receptor-like serine/threonine-protein kinase IOS1 691 898 - -
Spst4g01486 904 SUPERFAMILY Protein kinase-like (PK-like) 595 886 IPR011009 -
Spst4g01486 904 Gene3D Transferase(Phosphotransferase) domain 1 691 902 - -
Spst4g01486 904 Gene3D Ribonuclease Inhibitor 356 528 IPR032675 -
Spst4g01486 904 Gene3D Phosphorylase Kinase; domain 1 577 690 - -
Spst4g01486 904 Gene3D - 192 347 - -
Spst4g01486 904 FunFam serine/threonine-protein kinase PBS1-like 582 690 - -
Spst4g01486 904 Pfam Leucine rich repeat 438 496 IPR001611 GO:0005515
Spst4g01486 904 SMART LRR_typ_2 436 458 IPR003591 -
Spst4g01486 904 SMART LRR_typ_2 459 482 IPR003591 -
Spst4g01486 904 SMART serkin_6 615 890 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g01486 Spst-Chr4 53470170 53476317 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst4g01486 10 900 Receptor kinase-like Gene Family AT5G48740 62.851 0.0 1109
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Spst4g01486 Malectin_like 2e-53 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g01486 - - gmx:100812804 1617.44