Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g01469 ATGATTTATGAATGCATGGACAATTTGCTATGTGATGAGGTCTGGTTTTCGGGTTCTGAAAATACCTTTGAAGAAGTTGGTGACTTTGTTGCATTCAAGAGTTATGAAAACAAGGAATTTGAAGAGGCTTTTACACTGTATCTAGAGAAGGAGGTTTCTTCTTTGCCTGAACAAGACTATACACACTACTTACACTCCAACAATTTGTTTGTTCCTAGGTGTAAAGTTATTCAATGGCTTATCAAGTGTGGAAGTCACTTTAATCTTTCCTTTGGGACAGTTTTCTTGGCTGTGAATTATCTTGATCGCTTTGTATCCATTTGTCAATGCAATGCTTGGAAATACTGGATGTTTGAATTGCTTTCTATTGCTTGTTTATCAATTGCCATAAAGTTCAATGAGATCTCAGCACTTTCCTTGCATGAAATTCAGGTGGAGGGTTTGGACTACTCATTCCAATCAAATGTAATTTTGAAAATGGAGCTGATCCTATTGAAGGCATTGGGGTGGCATCTTAACTCTGTGACAAGTTTTGCTTTTGTGGAGATGCTAGATGTTGATTTCTTGGAATCTCATCTTTATGAGAAGCTTATTTCATCAGTCACTGAACTCCTTCTCCAAGCTACTTTAGATCAGAAAATGCTGGAGTTCAGACCAAGCATTGTTGGCATATCTGCATTGTGGTGCACTCTAGACCACTTATTTCCACCAGCATCAGATACTTTCATAGCTTATATTCTGAGACTCTTGAGCCAAACTCAGAAGGAGGATATCATCAAGTGTCATGAGTTGATGCAAACACAAACTTCATTGTGCTGTGAAAATCACCACCACTGCCCTTTAAGCCCAACAACAGTACTGTTATGA 867 0.3829 MIYECMDNLLCDEVWFSGSENTFEEVGDFVAFKSYENKEFEEAFTLYLEKEVSSLPEQDYTHYLHSNNLFVPRCKVIQWLIKCGSHFNLSFGTVFLAVNYLDRFVSICQCNAWKYWMFELLSIACLSIAIKFNEISALSLHEIQVEGLDYSFQSNVILKMELILLKALGWHLNSVTSFAFVEMLDVDFLESHLYEKLISSVTELLLQATLDQKMLEFRPSIVGISALWCTLDHLFPPASDTFIAYILRLLSQTQKEDIIKCHELMQTQTSLCCENHHHCPLSPTTVLL 288
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g01469 288 Gene3D - 57 173 - -
Spst4g01469 288 SUPERFAMILY Cyclin-like 40 173 IPR036915 -
Spst4g01469 288 SMART cyclin_7 78 166 IPR013763 -
Spst4g01469 288 CDD CYCLIN_AtCycD-like_rpt2 175 265 - -
Spst4g01469 288 ProSitePatterns Cyclins signature. 73 104 IPR006671 -
Spst4g01469 288 PANTHER CYCLINS 40 267 IPR039361 -
Spst4g01469 288 Pfam Cyclin, N-terminal domain 43 173 IPR006671 -
Spst4g01469 288 Gene3D - 48 263 - -
Spst4g01469 288 Pfam Cyclin, C-terminal domain 176 269 IPR004367 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g01469 Spst-Chr4 53306888 53308677 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst4g01469 42 277 Core Cell Cycle Gene Families AT1G70210 30.417 4.48e-30 114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g01469 K18813 - gmx:100792420 394.43