Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g01465 ATGACACAGGCGGTGGGGCGGAGCAGGGTGGTCGGAGACTACGTGGTGGGGAAGCGAATCGGTGAGGGGTCTTTCTCGGTGGTGTGGCACGGAAGGCACAAGGTGCACGGAACCGAGGTGGCGATAAAGGAGATTGCCATGCTCCGCCTCAACAAGAAGCTGCAGGAGAGCCTCATGTCCGAGATTTTCATCTTGAAGCGGATTAACCACCCTAACATAATCTCTTTGTACGATATCATTCAGGTTCCTGGGAAGATACATCTTGTGCTAGAATACTGTAGAGGGGGAGATCTGTCCTTGTACATTCAACACCATGGACGGGTACCAGAGACAACTGCAAAGTATTTTATGCAGCAGCTGGCTGCTGGTCTACAAGTTCTTCGGGATAATAACCTTATTCATCGAGATCTGAAACCACAGAACCTTCTTCTCTCCCAAAATGATGAGAAGTCAGTGCTGAAGATTGCTGACTTTGGATTTGCAAGGTAG 489 0.4949 MTQAVGRSRVVGDYVVGKRIGEGSFSVVWHGRHKVHGTEVAIKEIAMLRLNKKLQESLMSEIFILKRINHPNIISLYDIIQVPGKIHLVLEYCRGGDLSLYIQHHGRVPETTAKYFMQQLAAGLQVLRDNNLIHRDLKPQNLLLSQNDEKSVLKIADFGFAR 162
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g01465 162 Pfam Protein kinase domain 14 162 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst4g01465 162 PANTHER SERINE/THREONINE-PROTEIN KINASE UNC-51-RELATED 3 162 IPR045269 GO:0004674|GO:0006914
Spst4g01465 162 ProSiteProfiles Protein kinase domain profile. 14 162 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst4g01465 162 Gene3D Transferase(Phosphotransferase) domain 1 5 162 - -
Spst4g01465 162 ProSitePatterns Protein kinases ATP-binding region signature. 20 43 IPR017441 GO:0005524
Spst4g01465 162 SUPERFAMILY Protein kinase-like (PK-like) 9 162 IPR011009 -
Spst4g01465 162 FunFam Non-specific serine/threonine protein kinase 1 94 - -
Spst4g01465 162 ProSitePatterns Serine/Threonine protein kinases active-site signature. 132 144 IPR008271 GO:0004672|GO:0006468
Spst4g01465 162 SMART serkin_6 14 162 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g01465 Spst-Chr4 53156898 53159324 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst4g01465 9 161 CBL-interacting serine-threonine protein kinases AT5G35410 40.909 9.90e-32 115
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK Group-Pl-3 Spst4g01465 Pkinase 4.7e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g01465 K08269 - gmx:100789255 298.516