Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g01464 ATGCTTAAGACTCATGATAGCCCAGCATTACGCTTGATATCATTGCAACCTAGGGGCCTTGCTGAAACCTTGTGTGGCTCACCACTCTATATGGCTCCAGAAATCATGCAACTGCAGAAGTATGATGCTAAGGCAGATCTCTGGAGTGTTGGTGCAATCTTATTTCAGCTGGTTACAGGAAGAACACCTTTTACTGGAAACAATCAAATACAGTTACTACAGAATATTATGAAATCAACAGAATTGCAGTTTCCATCTGATAGCCCAAGTCTGAGTTTTGAATGCAAAGATTTGTGTCAGAAATTGCTACGTCGGAATCCAGTGGAACGTCTAACTTTTGAAGAATTTTTTAACCACCCTTTTCTTTCTCAGAAGCAAAGAGAACAGGTTGATGAGCCATTGAGGAGTAGAAGTTCTTCAAGGCTGGTTGGTGGGTTTTTTCCTACAGTGTCTGACCCTTTGAACACAACTGAGGAAAACTATCAAGAAGATTGTTTGCCTTTCATCCTAGATGATGACCCTAGTGGCCCTGAGGGGAGTCCATCCTTTTCGAGAAAAAAGTCCTCAATAAAGTCCACCTATGGATTTGATCTAAATTCTAAACTAGATAAACCAGAATCAGCATCTCCTATGTCTAATAACATAAATTCTAATTCAGGATTTGGTAGTATAACACAAAGCTCTGAAAATACTGCTAGAAGATTGGACAACCATAAAATTTCAAGAAATGTCACTGATCCTCTAGGATCTCCAGAACGGATGATCGCAAGTTCTTATCCAAAAGGTAATACAAAGTATTTTTTTGGTTCTCATTTCTGTTTTCATAGTTGGGATTCAGGGTATTCTTATTCTATTTTATGTATAATGCTTGTGAAATGCATGACAGTTACGGATTCCCTGGAGAATATTGATCAAGAATATGTACTGGTGCCTGGCCCCCCTATAGATATTTCATCTTCTTTGGTGTGTACTTCAAGGCCCAGCCATACCCCATATAGGTCTGGTAGTTTACCCCAAGAGTCTTCTAGTACACTCAGTAGACCAAGTGCTCCAATGCCAATAGTTGGTGTACCCACCAATAGCACATACCAAATTGGAAGTTCAGGAAGTCAGGACTCTGCTCCTGGGACTTCGCTTGGATCAATGGATACAGGTGATGAACAGCCATCAGCCCACTGCATGACAAGGGTAAAATCATTGCAACAGTGTGCATCTGCCATCACTGAATTAGTTAATGAAAAGATGGAGGCAGGAAAGCATCTAGAAGCATTTTCTATTCAGCTTGTTATTCTTGCAATCTGGAAGCAAGCACTGCACATATGCCATACACAAGCTGCCTCAGCCATGGAAGGGAGTCCTAGTCAAGAAACTTCAAGATATAGAAGGAGTGCCAGCAGGAAGGTTGGCAGTCCTGATTCGGAAGAATGCCTTGAGGGAAACACCCTAGGGCCAAAGGATATATTATCTAAAATTGAAAGTGAATTTTTGAGGGAATTTGAGCATGCTGAAGAACTTGCCAAAACCGTTGAGCCTGGAAACACTGAGATGCCAGATGCAATGGAGACAATATTTCAATCTGCCCTTGCTTTTGGAAGGCACGGGGGTGTAGAGGAGCTGATGGGTGACATGGAAAGTGCAGCTGCATTGTATTCAAAAGCTGTCCGTCTGCTAGTTTTCCTTCTAGTGGAAGGACCATCCCTGATTCTTAATCCTCCGTTTTCTCTGACAAACTCAGATCGTTACAGACTTCGAAATTACATTGATATTCTTAATAACAGGCAAGGTTTTTCAAGGTCCCAGCGAATGACACTACTGAAATGTGATGAAAGCCAAGGCATCTTAAAGGAAAAAATTTAG 1857 0.4136 MLKTHDSPALRLISLQPRGLAETLCGSPLYMAPEIMQLQKYDAKADLWSVGAILFQLVTGRTPFTGNNQIQLLQNIMKSTELQFPSDSPSLSFECKDLCQKLLRRNPVERLTFEEFFNHPFLSQKQREQVDEPLRSRSSSRLVGGFFPTVSDPLNTTEENYQEDCLPFILDDDPSGPEGSPSFSRKKSSIKSTYGFDLNSKLDKPESASPMSNNINSNSGFGSITQSSENTARRLDNHKISRNVTDPLGSPERMIASSYPKGNTKYFFGSHFCFHSWDSGYSYSILCIMLVKCMTVTDSLENIDQEYVLVPGPPIDISSSLVCTSRPSHTPYRSGSLPQESSSTLSRPSAPMPIVGVPTNSTYQIGSSGSQDSAPGTSLGSMDTGDEQPSAHCMTRVKSLQQCASAITELVNEKMEAGKHLEAFSIQLVILAIWKQALHICHTQAASAMEGSPSQETSRYRRSASRKVGSPDSEECLEGNTLGPKDILSKIESEFLREFEHAEELAKTVEPGNTEMPDAMETIFQSALAFGRHGGVEELMGDMESAAALYSKAVRLLVFLLVEGPSLILNPPFSLTNSDRYRLRNYIDILNNRQGFSRSQRMTLLKCDESQGILKEKI 618
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g01464 618 MobiDBLite consensus disorder prediction 365 385 - -
Spst4g01464 618 PANTHER SERINE/THREONINE-PROTEIN KINASE UNC-51-RELATED 14 527 IPR045269 GO:0004674|GO:0006914
Spst4g01464 618 SUPERFAMILY Protein kinase-like (PK-like) 21 355 IPR011009 -
Spst4g01464 618 SMART serkin_6 1 122 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst4g01464 618 ProSiteProfiles Protein kinase domain profile. 1 122 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst4g01464 618 MobiDBLite consensus disorder prediction 205 231 - -
Spst4g01464 618 MobiDBLite consensus disorder prediction 169 188 - -
Spst4g01464 618 MobiDBLite consensus disorder prediction 326 351 - -
Spst4g01464 618 MobiDBLite consensus disorder prediction 445 481 - -
Spst4g01464 618 MobiDBLite consensus disorder prediction 365 391 - -
Spst4g01464 618 Gene3D Transferase(Phosphotransferase) domain 1 10 144 - -
Spst4g01464 618 MobiDBLite consensus disorder prediction 202 247 - -
Spst4g01464 618 Pfam Protein kinase domain 21 122 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g01464 Spst-Chr4 53150263 53156852 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst4g01464 13 142 EF-hand Containing Proteins AT4G23650 36.641 7.90e-19 88.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK Group-Pl-3 Spst4g01464 Pkinase 2.4e-22 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g01464 K08269 - gmx:100791596 991.104