Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g01455 ATGGAGTTCATCACGATGTGGCTTATCATCATCATCATCACACTCTTCTTGTTCGTTTTCATTTTGGTTCTTCTTTTGCATGTTATTTTCAATCTCATTTATCTTCATGTTTGTGCTCTTTCAACCAAAGTCAACTCGACTAACTCTATGAGTAACTCCACCCACTCTCTCGATGACACCATTAGCACTGTTGGTGACTCCCTCACCACATTAATGTCACCACCAACGTATCAGTCACGAATGAAGGCAATTGAAAAAAGGGTTTCGTTGTGGGAACAAGACTCAGATAACCCTTATGAAGACTTTCGACGATCCATCCAAGAGTTGATTGAAGTTTACCCTGAGTTGGCAAAATCTAACAACATGAATGAACTTTTTAGCCAATATCTTGAGTACAACTCACAGAACTTACACCCTTTTATCGTCCAAGCTTTTATTGATTTTTCTGTTGATCTCACTTTGAAGGGGATTGTTTAA 477 0.3857 MEFITMWLIIIIITLFLFVFILVLLLHVIFNLIYLHVCALSTKVNSTNSMSNSTHSLDDTISTVGDSLTTLMSPPTYQSRMKAIEKRVSLWEQDSDNPYEDFRRSIQELIEVYPELAKSNNMNELFSQYLEYNSQNLHPFIVQAFIDFSVDLTLKGIV 158
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g01455 158 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 50 148 IPR038933 GO:0045892
Spst4g01455 158 ProSiteProfiles OVATE domain profile. 91 151 IPR006458 -
Spst4g01455 158 NCBIfam uncharacterized plant-specific domain TIGR01568 93 153 IPR006458 -
Spst4g01455 158 Pfam Transcriptional repressor, ovate 95 152 IPR006458 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g01455 Spst-Chr4 52976009 52976485 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Spst4g01455 Ovate 2.7e-16 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g01455 - - bvg:104898266 61.6178