Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g01453 ATGGAAGTGAAAGCTGAGATTGTGTCTAAGAACACAATAAAGCCATCATCTGCAACACCCAATAACCTTCGACACTGGAAACTCTCCCTCCTCGATCAATTGGCTCCACCATTTTACGTCCCTATCCTCCTCTTTTACCCTGCTTCCGATGCCAAAGACTTCAAAACAATATCTCACAAGTTGAAGGCTTCTTTATCACAAGTCCTCACTCTCTACCCTCCCTTTTGCGGAACCCTGAGAGACAACACAACCGTTGAGTGCAACGATGAGGGTGTTCTCTTCATGGAGTCTAGAGTCCCCATAGAACTCTCAAACGTTCTGAAAAACCCTAACCTTCACCAGATCAACCAACTTTTCCCATGCGATCCCTACAACCCTGCAAGGGAAACCCTGCTAGGAAGCATGGCAGTTCAGTTGAACCAATTCAAGTGTGGGGGTGTTGCACTTGGCGTTTGCCTTTCTCACAAGATCGCTGATGCTTCCTCTGCAGCTTCCTTCCTAAGCGCTTGGTCTGCAACATCAAGAAGTGAAGACAACAGATTGATACAACCTCAGATGGAAGAAGGGGTGCAGGTTTTCCCACCGAGGAAGATAGAAATGGACATTACTCGTGGCATGATGGGCCAAAAAAACGTCTTGTCAAAGAGGTTCGTATTCAACGGGACCAACATATCTAGACTGAAGCAAGAACTGGGGTGCTTCGATTTCAACCCCACCCGTGTTGAAGCCGTGACAGCACTCATATGGAAATCATCGTTGGAAGCGGCGAAAGCAAGTTCAGAGGAACAGAAGTTTCCCACGTCTGTCATATCCCATGCGGTGAACCTTCGCAGCAGAATGACCTCAACTTTGTCGAAGCATTCAGTGGGAAATATGTGGCAACAAGCAGTGTCTCCGTTGGTGGAGGTAGAAGGAGAAGTGGGGTTGCGTGATTTGGGCGAGAGAGTGAGGGAAACGGTAAGAAAAGTTGATGGAAATTATGTGAGTAAGCTTCAGGGTGGTGAGTTTTATAAGGTCTTAGAGTCTTTGAATGAAACGAGAATAATGATCTCAGAAAAGGGTGTTCCATGTTATAGCTTTAGCAGTTGGGTCAGATTTGGGTTCTATGAGACAGATTTTGGATGGGGAAAGCCAAGTTACGTGCGCACCATCGGAGTGCCTATAAAAAACGTGGTGATTTTGATGGGCACGAAGGATGGAGATGGCATAGAGGCATGGGTAACGTTGACCACTCGTGACATGGTGCATTTTGAGCAAAATCCTGAACTTCTGCAGTTTGTGTCGTTTGAATGTTAA 1296 0.4637 MEVKAEIVSKNTIKPSSATPNNLRHWKLSLLDQLAPPFYVPILLFYPASDAKDFKTISHKLKASLSQVLTLYPPFCGTLRDNTTVECNDEGVLFMESRVPIELSNVLKNPNLHQINQLFPCDPYNPARETLLGSMAVQLNQFKCGGVALGVCLSHKIADASSAASFLSAWSATSRSEDNRLIQPQMEEGVQVFPPRKIEMDITRGMMGQKNVLSKRFVFNGTNISRLKQELGCFDFNPTRVEAVTALIWKSSLEAAKASSEEQKFPTSVISHAVNLRSRMTSTLSKHSVGNMWQQAVSPLVEVEGEVGLRDLGERVRETVRKVDGNYVSKLQGGEFYKVLESLNETRIMISEKGVPCYSFSSWVRFGFYETDFGWGKPSYVRTIGVPIKNVVILMGTKDGDGIEAWVTLTTRDMVHFEQNPELLQFVSFEC 431
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g01453 431 Gene3D - 209 426 IPR023213 -
Spst4g01453 431 Pfam Transferase family 4 423 - -
Spst4g01453 431 Gene3D - 1 201 IPR023213 -
Spst4g01453 431 PANTHER F21J9.9 6 428 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g01453 Spst-Chr4 52936951 52938973 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst4g01453 3 419 Monolignol Biosynthesis Gene Families AT5G48930 25.843 2.92e-26 108
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g01453 K13065 - gmx:100792323 669.463