Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g01443 ATGGACAAGATGACATTCATCGCATTGATTTCCGTTTTATACGTATGCATCCATATCTTAGTCTTTAGCCTTAGTAGCAAAAACACAAAATATCCCAAGCTAGCACCTGGTCCACCCAGTTATCCCATCATAGGAAACATATTACAGCTTGGCCCAGCAAAACTGCACCAAGCACTTGATAAACTCTCCAAAACATATGGACCTATTATGACTGTTAAGATAGGCACTATCACCACTGTGGTAATTTCCTCTCCAAGCATCGCCAAAGAAGCCCTTCACAAAAATGACCAAGCCTTGGCTAGTCGATTTATACCTGAGTCTGTCCAAGCACTTTCACATGATCATTCTTCTGTAGTATTCTTGCCCGTGTCAACAAAGTGGAGGACCCTTAGAAAAGTTTGTGCCACCAAAATTTTCTCCTCCCAACAACTTGATTCCACCCAAGCTCTACGCCAAAAAAAGATGAAGGACCTACTTGATTACCTGCATGAAAATTGCCAAAAGGGTCTTCCTATTGATATTGGTGAGACTGCATTTACTACAGTGCTTAACTCAATATCAAACACCCTTTTTTCCGTTGACTTGGCTTCTTATAGCTCTGGTATTTCTCAAAAGTTTAGGAATGTTATTTCTAGTGTGCTCGCAGAAGCTTCAAAACCTAACATTGCAGACTATTACCCTATTTTTCGTAGACTTGATCCACAGGGAGCACGACAAAGGATGCAAAACTACTACCGAACGTTGCTTGATGTTTTCGATTGTATTGTTGAAGAAAGAACTCAAAGGGTTGATTCCATTGATGGAGATGATGTGTTAGACTCATTTCTTGATATCACACGAAGGGAAAATTCAGAACTAACACGCCATGATGTGTTACATCTATTTCTGGACTTATTCGTGGCTGGATTGGACACTACATCAGCTACAATAGAGTGGGTTATGGCAGAGCTACTACACAACCCAGAAAAACTATCAAAAACCAAGAAGGAACTTGATCAAGTTCTTGGTGAGAGTGGGTTGGAAGCTAAAGATTCGAATATATGGAAACTCACTTACCTACAAGCAGTTGTGAAAGAAACCCTTAGATTGCACCCAACAGCCCCAATATTAATCCACAAATCAGTGGGTGAAGTGGACATATGTGGCTTCCATGTACCCAAAGATGCACAAGTTCTTGTTAATGTATGGAGCATGGGGCGAGACTCAAAGACTTGGAAGGACCCAAATGCATTTGTACCTGAAAGATTTTTAGAGAATGAAAAGGATTTCAGAGGAGACGATTATGGTTTCATTCCTTTTGGGTCTGGTAGAAGAATGTGCCCAGGTGTTCCACTAGCTAACAGGATTGTGCATACCATCTTGGCCTCACTTCTATACCATTTTGATTGGAAGCTAGCAGACGGAGAACAATCACCAGACATGGACATGACTGAGAAATTCACCATTACTTTACACAAACTTGCAACAGAAAAACTCTTCCACTCACATCCATTCTACAATGCTCACAATTTCATAGATGAAGAAGGGTGGCCTTTGGGTTTGAGACTATTGAATGCAAGAATTGGGTTACAGAGAAATGGTGATTTCTCTGGATCAGTCTCCTTCAGCACTATGCTCACTGCTTCTCCCACCCTTTCGACTGATTCTTCCTCAGATGTTGACTCACAGTCCACTGGAACATTCTTCCGAGACAAGAGCATCACGCTTGGCAGCCTCATTGGAATTTCTAGCTTCCTAGAAGTCTCAAGGAGATCAAGCAGAGGAAGAATGGTGCAACCCTCAAAGAACAACGAAAAGAATCACAAGCTGAGGCATTGGTTGTTCTCACTTTGTTCAAAGCTAACTACTGATGCAGTGAGTGTGAATTCTGCTGCTCCCTCACTTGGTAACAATCTTGTGTCAGAAAGAAGAGCCGCAAATCAAAGAAAGAATAATCAATGTTCTAACATTCATGGACCTAATCATTTGTCCCCAGTTCAAGAGCCAAACTCGCTGTTTCATGGTTCATCAACAACATTTGGTGATGGAAGAGCGCCAGATAAAGCATTGGAGCAAAGCAATGGATATGGAACACCAATAATTCTCTGTTGTTTGTGCAGATAA 2103 0.4142 MDKMTFIALISVLYVCIHILVFSLSSKNTKYPKLAPGPPSYPIIGNILQLGPAKLHQALDKLSKTYGPIMTVKIGTITTVVISSPSIAKEALHKNDQALASRFIPESVQALSHDHSSVVFLPVSTKWRTLRKVCATKIFSSQQLDSTQALRQKKMKDLLDYLHENCQKGLPIDIGETAFTTVLNSISNTLFSVDLASYSSGISQKFRNVISSVLAEASKPNIADYYPIFRRLDPQGARQRMQNYYRTLLDVFDCIVEERTQRVDSIDGDDVLDSFLDITRRENSELTRHDVLHLFLDLFVAGLDTTSATIEWVMAELLHNPEKLSKTKKELDQVLGESGLEAKDSNIWKLTYLQAVVKETLRLHPTAPILIHKSVGEVDICGFHVPKDAQVLVNVWSMGRDSKTWKDPNAFVPERFLENEKDFRGDDYGFIPFGSGRRMCPGVPLANRIVHTILASLLYHFDWKLADGEQSPDMDMTEKFTITLHKLATEKLFHSHPFYNAHNFIDEEGWPLGLRLLNARIGLQRNGDFSGSVSFSTMLTASPTLSTDSSSDVDSQSTGTFFRDKSITLGSLIGISSFLEVSRRSSRGRMVQPSKNNEKNHKLRHWLFSLCSKLTTDAVSVNSAAPSLGNNLVSERRAANQRKNNQCSNIHGPNHLSPVQEPNSLFHGSSTTFGDGRAPDKALEQSNGYGTPIILCCLCR 700
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g01443 700 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 433 442 IPR017972 GO:0005506|GO:0016705
Spst4g01443 700 PRINTS E-class P450 group I signature 394 418 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst4g01443 700 PRINTS E-class P450 group I signature 87 108 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst4g01443 700 PRINTS E-class P450 group I signature 290 307 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst4g01443 700 PRINTS E-class P450 group I signature 310 336 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst4g01443 700 PRINTS E-class P450 group I signature 354 372 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst4g01443 700 PRINTS E-class P450 group I signature 440 463 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst4g01443 700 PRINTS E-class P450 group I signature 430 440 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst4g01443 700 PRINTS E-class P450 group I signature 63 82 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst4g01443 700 PRINTS P450 superfamily signature 355 366 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst4g01443 700 PRINTS P450 superfamily signature 301 318 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst4g01443 700 PRINTS P450 superfamily signature 431 440 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst4g01443 700 CDD CYP76-like 63 486 - -
Spst4g01443 700 MobiDBLite consensus disorder prediction 646 671 - -
Spst4g01443 700 Pfam Cytochrome P450 36 482 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst4g01443 700 MobiDBLite consensus disorder prediction 646 679 - -
Spst4g01443 700 SUPERFAMILY Cytochrome P450 36 485 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst4g01443 700 FunFam Cytochrome P450 76C4 26 492 - -
Spst4g01443 700 Gene3D Cytochrome P450 20 499 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst4g01443 700 PANTHER CYTOCHROME P450, FAMILY 76, SUBFAMILY C, POLYPEPTIDE 5-RELATED 12 487 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g01443 Spst-Chr4 52734318 52741380 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst4g01443 34 489 Cytochrome P450 AT2G45550 46.336 9.75e-146 433
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g01443 - - pvu:PHAVU_010G012700g 735.332