Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g01423 ATGAGTAGGATGTCTATTATGTCTTTCAATTCTTACCCTATTTTTGTGATTGTTTTTGCCTTTTTTGTGCGCATATCATCTCAGGTTGGTTCAAAGGTAGAAGTGCTTCCTGGGTTTGAAGGGCCTCTTCCTTTTGAACTGGAAACAGGGTATGTAGGATTGGGAGAAACAGATGATGATATGCAAGTGTTTTACTACTTTATCAAGTCAGAGAATGACCCTGCAAAAGACCCTCTTATGCTTTGGCTTACTGGAGGTCCTGGTTGCTCTTCATTTTCGGGTCTTGCTTTTCAAATCGGTCCTCTTGCATTCAAGATTGAAGAGTACAATGGGAGCTTGCCAAATTTGATCTTGAGGCCACAGTCCTGGACAAAGGCATCTAGCATTATTTTCGTAGATTTGCCCTTAGGATCTGGTTTCTCATATGCCAAAAATGTCACCGCTCACAGGAGTGACTGGAAATTAGTTCACCATACCCATCAATTTCTTAGGAAGTGGCTGATCGATCACCCAGAATTTATTTCGAATGCATTTTACATGGGAGCTGATTCATATTCTGGCATACCTGCCCCTGCCATTGTTCAAGAAATTTCAAAGGGAAATGAAATAGGTCTCCAACCAATTATAAATCTCCAGGGATATCTACTAGGAAACCCCGTAACAACACGAAAAGAAAAAAATGAGCAAATCCCATTTGCTCATGGAATGGGACTTATTTCTGATGAACTTTATGCGTCACTGAAGAAAAATTGTAAAGAGGAATATATAACCGTAGATTCTAGAAATGAATTGTGTTTAAGAGATATGAAGTCCTACGATGAGTGTCTTTCAGGAATTAATACATTCTTCATTTTAGATCGCTATTGTAAAGATAATTCGCGAAAGATAAATGAAGATACATGGAGGAGATCTTTGACCCAAAAGTCTAAGTCATCATCCCTGAATTCTCATCCCATAACGGTAGACATAGACATAAGATGCCAAATATATGGTTTTTTCCTTGCCACTCAATGGGCCAATGATAAAAGTGTTCGTAAATCGTTGCACATTCGAGAGGGAACTAAAGACAAGTGGAGTCGTTGTTACACGAGTGATTTTGAGTATGAGATCTCTAATAGTTTTGAGTTTCACTTAAATCTCAGTGTTAAAGGATATCGTTCTTTGATATATAGTGGAGACCATGATGCAGTTGTTCCTTTCATATCGACTCAAGCATGGATTAGAGCTCTGAACTACTCCATTGTAGAAGATTGGAGGCCATGGCTTTTAGAAGATCAAGTTGCAGGATATACAAGGACATACTCTAATCAAATGACATTTGCAACAGTGAAAGGTTCAGGACACACAGCTCCAGAGTACAAGCCCGATGAAGGTTACGCCATGTTCACTAGGTGGATAGCTAATAAGCCTTTGTGA 1416 0.3919 MSRMSIMSFNSYPIFVIVFAFFVRISSQVGSKVEVLPGFEGPLPFELETGYVGLGETDDDMQVFYYFIKSENDPAKDPLMLWLTGGPGCSSFSGLAFQIGPLAFKIEEYNGSLPNLILRPQSWTKASSIIFVDLPLGSGFSYAKNVTAHRSDWKLVHHTHQFLRKWLIDHPEFISNAFYMGADSYSGIPAPAIVQEISKGNEIGLQPIINLQGYLLGNPVTTRKEKNEQIPFAHGMGLISDELYASLKKNCKEEYITVDSRNELCLRDMKSYDECLSGINTFFILDRYCKDNSRKINEDTWRRSLTQKSKSSSLNSHPITVDIDIRCQIYGFFLATQWANDKSVRKSLHIREGTKDKWSRCYTSDFEYEISNSFEFHLNLSVKGYRSLIYSGDHDAVVPFISTQAWIRALNYSIVEDWRPWLLEDQVAGYTRTYSNQMTFATVKGSGHTAPEYKPDEGYAMFTRWIANKPL 471
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g01423 471 SUPERFAMILY alpha/beta-Hydrolases 36 470 IPR029058 -
Spst4g01423 471 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 32 455 IPR001563 GO:0004185|GO:0006508
Spst4g01423 471 Gene3D alpha/beta hydrolase 26 301 IPR029058 -
Spst4g01423 471 PRINTS Carboxypeptidase C serine protease (S10) family signature 166 191 IPR001563 GO:0004185|GO:0006508
Spst4g01423 471 PRINTS Carboxypeptidase C serine protease (S10) family signature 132 142 IPR001563 GO:0004185|GO:0006508
Spst4g01423 471 PRINTS Carboxypeptidase C serine protease (S10) family signature 438 451 IPR001563 GO:0004185|GO:0006508
Spst4g01423 471 PRINTS Carboxypeptidase C serine protease (S10) family signature 119 131 IPR001563 GO:0004185|GO:0006508
Spst4g01423 471 FunFam Serine carboxypeptidase-like 11 27 471 - -
Spst4g01423 471 FunFam Carboxypeptidase 326 470 - -
Spst4g01423 471 Gene3D - 326 471 - -
Spst4g01423 471 Pfam Serine carboxypeptidase 37 468 IPR001563 GO:0004185|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g01423 Spst-Chr4 52186340 52190799 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst4g01423 24 56 Calmodulin-binding Proteins AT2G22960 63.636 1.12e-07 50.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g01423 K16296 - gmx:100780069 795.808