Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g01420 ATGAGATGGGGGAGGAAAAATCCATCCGTTACCATGCCTGGAAGGTCTTCACTGCTTTCGCCGGTCGGTAACGAAGATCTACAAGTTGGTTCAAAGGTAGAAGTGCTTCCTGGGTTTGAAGGGCCTCTTCCTTTTGAACTGGAAACAGGCAACAACAGGTATGTAGGATTGGGAGAAACAGATGATGACATGCAAGTGTTTTACTTCTTTATCAAGTCAGAGAATGACCCTGCAAAAGACCCTCTTATTCTTTGGCTTACTGGAGGTCCTGGTTGCTCTTCAATATCTGCTCTTGTCCTTCAAATAGGTCCACTTGCATTTAAGATTGAAGAGTATAATGGGAGCTTGCCAAATTTGATCTTGAAGCCACAGTCCTGGACAAAGGCATCTAGCATTATTTTCGTAGATTTGCCCTTAGGATCTGGTTTCTCATATGCCAAAAATGTCACCGCTCACAGGAGTGACTGGAAATTAGTTCACCATACCCATCAATTTCTTAGGAAGTGGCTGATCGATCACCCAGATTTTATTTCCAATGAATTTTACATGGGAGGTGATTCATATTCTGGCATACCTTCCCCTGCCATTGTTCAAGAAATTTCAAAGGGTATTCATTGGAGAAAAATTGTAAAGGAGAATTTGTATCTCAAGATTCTAGAAGTGAATCGTGCACAAGTGATCTCAATTACTATCAAGAGGCAATGTCTTTCAAGAATTGATACATACTACATTTTGGATAGCTATTTTTGCAAAGAAGACACTCTTAAGAAGAATGGAGATATGTGGAGGAGATCTCTGACCCAAAAATTTGAGTCATCTCTTAATTATCAACTTGTACCTGACAAAAGATGCAAAACATATACTTTTTTTCTTTTAACTCAATGGGCCAACGATGAGAGTGTTCGCAAAGCACTACACCTTCGAGAGGGAACTACAGGCAGGTGGCAACGATGTAATTCCCATGGTTATGAGTATGAAATTTCTAGTAGCTTCGAGTTTCATGTTAATCTTAGTGCTAAAGGATATCGTTCTTTAATATATAGTGGGGACCATGATGCTGCTGTTTCTTTCATGTCGACTCAAGCATGGATCAGAGCTCTAAACTACTCCATTGTAGACGATTGGAGGCCATGGCTTCTAGAAGGACAAGTTGCAGGATACACAAGGACATACTCTAATCAAATGACATTTGCAACTGTAAAGGGTTCAGGACACACCGCTTCTGTATTCAAGCCTGATGAATGTTTAGCCATGTTTACTAGGTGGATAACTAATAAGTCTTTGTAA 1287 0.4017 MRWGRKNPSVTMPGRSSLLSPVGNEDLQVGSKVEVLPGFEGPLPFELETGNNRYVGLGETDDDMQVFYFFIKSENDPAKDPLILWLTGGPGCSSISALVLQIGPLAFKIEEYNGSLPNLILKPQSWTKASSIIFVDLPLGSGFSYAKNVTAHRSDWKLVHHTHQFLRKWLIDHPDFISNEFYMGGDSYSGIPSPAIVQEISKGIHWRKIVKENLYLKILEVNRAQVISITIKRQCLSRIDTYYILDSYFCKEDTLKKNGDMWRRSLTQKFESSLNYQLVPDKRCKTYTFFLLTQWANDESVRKALHLREGTTGRWQRCNSHGYEYEISSSFEFHVNLSAKGYRSLIYSGDHDAAVSFMSTQAWIRALNYSIVDDWRPWLLEGQVAGYTRTYSNQMTFATVKGSGHTASVFKPDECLAMFTRWITNKSL 428
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g01420 428 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 34 411 IPR001563 GO:0004185|GO:0006508
Spst4g01420 428 Gene3D alpha/beta hydrolase 28 428 IPR029058 -
Spst4g01420 428 Pfam Serine carboxypeptidase 37 214 IPR001563 GO:0004185|GO:0006508
Spst4g01420 428 Pfam Serine carboxypeptidase 237 425 IPR001563 GO:0004185|GO:0006508
Spst4g01420 428 PRINTS Carboxypeptidase C serine protease (S10) family signature 169 194 IPR001563 GO:0004185|GO:0006508
Spst4g01420 428 PRINTS Carboxypeptidase C serine protease (S10) family signature 122 134 IPR001563 GO:0004185|GO:0006508
Spst4g01420 428 PRINTS Carboxypeptidase C serine protease (S10) family signature 395 408 IPR001563 GO:0004185|GO:0006508
Spst4g01420 428 PRINTS Carboxypeptidase C serine protease (S10) family signature 135 145 IPR001563 GO:0004185|GO:0006508
Spst4g01420 428 SUPERFAMILY alpha/beta-Hydrolases 36 427 IPR029058 -
Spst4g01420 428 FunFam Carboxypeptidase 331 425 - -
Spst4g01420 428 FunFam Carboxypeptidase 283 427 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g01420 Spst-Chr4 52107361 52118949 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst4g01420 270 428 Calmodulin-binding Proteins AT2G22960 53.125 8.74e-55 178
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g01420 K16296 - gmx:100780069 590.882