Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g01415 ATGGGATTTTCTGGTTTTACAAATGAAGTTCAGTTGGGAAATCAATCTTCACCAATTCTTCAGAATCAGAGATTTGATAATCGACCAAGATTTGAAAATCTCTTCTTTGATCAAAGTAGGAAATTTGACTATCTTCACTCTGATCCAAATCCAATCCCAGCTAACACATCTTCATCCTCCACTGTTACCCATGAGGATCATTCTCCAGAGGACTGTGATTTTTCCGATGCAGTTTTGAGTTACATCAGCCAGATCCTAATGGAGGACGATATGGAGGACAAGACATGCATGCTTCAAGATTCTTTAGATATTCAAGCAGCTGAAAAATCGTTCTATGAGGTGCTGGGTGAAAAATACCCTCCTTCTCCAAGAAATCCAAGCCTTATCATTGATGGGGTTGGAGGTTATGGCAATTTTCCTGATACTAATGGGGATCTAATGAGCATTTTTACCAACCAGTTTATGCCACCAAACTCAGCTAACTTTCCTGAGTACATTCATGGTAATAGCCTTATGCATTCATCTTATAACCCTTATAATAGTGTAATAGAAGGGCCGGTAGATTCTCTAAACAGTATAGTTCAGGTTCCTGATTTGAGCAGTGAAAGTCAATCCATTTGGCAATTTCAGAAGGGTGTTGAGGAGGCTAGTAAGTTTCTTCCTTGTGCAAGTGTTCTGCTTGCTAATTTGTCACAAATAGAGCCGAAAGTAGAAAAGGATGAATTGTCATTTAAAATGGAGAAGGAGGAGGGGGAATGTGTTTATGGTGGTGGATCCAAGGGAAGGAAGCATCCTCAAATGGATGAAACAGATGTTGAAGAAAACAGAAGCAGCAAGCAAGCGGCAATTTATTCTGAACCAACTCTGCGGTCAGAAATGGCTGATATATTCCTGCTTCATAGCACTGGGGATGGTAAGAACCACTACGTGGCTCGCCGCGAGGCTTTGCAGAACAAGACACAGAAAACAGTGCTGCCAAAAAGTCAATCGAAAGCATCTAGCAGCGGTAAGGGGCGAGGTAAGAAACTAGGTGGGAGGAAGGAAGTGGTCGATTTGAGAACACTTCTGGTTCTATGTGCACAAGCTGTTGCAGCAGATGACCATAGGAGTGCCAATGAGTTGCTAAAGCAGATCAGGCAACACTCAACCCCTTTTGGGGACGGAAGTCAGAGGTTGGCTCATATCTTTGCAGATGGCCTTGAGGCGCGTTTGGCTGGTACTGGCAGCCAAATTTACAAAGGACTTGTCTGTAGAAGAACATCAGCTGCTAATTTTCTAAAAGCTTATCATCTATACCTTGCTGCATGCCCCTTTAGGAAAATTTCTAACTTTACCTCAAACATCACAATAAGGGAATCTTCAGTACAGTCAATGAGAGTCCATGTTATAGATTTTGGCATGCTTTATGGTTTCCAATGGCCCACTTTTATACAGCGGCTTTCATGGAGAGAAGGAGGACCACCAAAGCTACGGATCACGGGAATAGACTTTCCACAACCTGGTTTCAGGCCAGCAGAAAGAGTCACAGAAACGGGACGGCGCTTGACAGCTTATGCTGAGGCCTTTAACGTTCCATTTGAGTACAAAGCTATAGCGAAAACATGGGACACAATTCAACTTGAGGAACTTGAGATTGATAGGGATGAGTTCCTTGTTGTTACTTGTTTCTATAGAGGTAAGAACTTGCTGGATGAATCTGTGGTAGTGGACAGTCCAAGAAATAATTTCCTCAGCCTAATTAGGAGGATCAACCCAAAATTGTTCATTCATGGCATCATGAATGGTGCGTTCAATGCCCCTTTCTTTGTTACCAGATTCCGGGAGGCATTGTTTCACTATTCATCGCTGTTTGATATGCTTGAGACTATCGTGCCTCGTGAGGACTGGGAGAGGATGCTGATAGAGAAAGAGGTATTGGGGAGGGAAGCATTGAATGTCATAGCTTGTGAAGGGTCTGAAAGAGTGGAGAGGCCAGAGAGTTACAAGCAGTGGCAAGCACGCATTCTGCGGGCCGGGTTTGTGCAACAATCTTTTGATCGTCAGACAGTGAAGATGGCAATGGAGAAAGTGAGGGGTAGCTACCACAAGGATTTTGTAATTGATGAAGATAGTCAGTGGTTGTTGCAAGGTTGGAAGGGGCGTATCATTTATGCTCTTTCTTGTTGGAGACCTGCATCATGA 2181 0.4333 MGFSGFTNEVQLGNQSSPILQNQRFDNRPRFENLFFDQSRKFDYLHSDPNPIPANTSSSSTVTHEDHSPEDCDFSDAVLSYISQILMEDDMEDKTCMLQDSLDIQAAEKSFYEVLGEKYPPSPRNPSLIIDGVGGYGNFPDTNGDLMSIFTNQFMPPNSANFPEYIHGNSLMHSSYNPYNSVIEGPVDSLNSIVQVPDLSSESQSIWQFQKGVEEASKFLPCASVLLANLSQIEPKVEKDELSFKMEKEEGECVYGGGSKGRKHPQMDETDVEENRSSKQAAIYSEPTLRSEMADIFLLHSTGDGKNHYVARREALQNKTQKTVLPKSQSKASSSGKGRGKKLGGRKEVVDLRTLLVLCAQAVAADDHRSANELLKQIRQHSTPFGDGSQRLAHIFADGLEARLAGTGSQIYKGLVCRRTSAANFLKAYHLYLAACPFRKISNFTSNITIRESSVQSMRVHVIDFGMLYGFQWPTFIQRLSWREGGPPKLRITGIDFPQPGFRPAERVTETGRRLTAYAEAFNVPFEYKAIAKTWDTIQLEELEIDRDEFLVVTCFYRGKNLLDESVVVDSPRNNFLSLIRRINPKLFIHGIMNGAFNAPFFVTRFREALFHYSSLFDMLETIVPREDWERMLIEKEVLGREALNVIACEGSERVERPESYKQWQARILRAGFVQQSFDRQTVKMAMEKVRGSYHKDFVIDEDSQWLLQGWKGRIIYALSCWRPAS 726
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g01415 726 MobiDBLite consensus disorder prediction 317 336 - -
Spst4g01415 726 ProSiteProfiles GRAS family profile. 343 723 IPR005202 -
Spst4g01415 726 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 278 717 IPR005202 -
Spst4g01415 726 MobiDBLite consensus disorder prediction 253 276 - -
Spst4g01415 726 MobiDBLite consensus disorder prediction 46 70 - -
Spst4g01415 726 MobiDBLite consensus disorder prediction 317 344 - -
Spst4g01415 726 MobiDBLite consensus disorder prediction 253 278 - -
Spst4g01415 726 Pfam GRAS domain family 352 723 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g01415 Spst-Chr4 52033965 52036145 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst4g01415 70 726 GRAS Transcription Factor Family AT2G37650 54.038 0.0 679
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Spst4g01415 GRAS 1.5e-113 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g01415 - - gmx:100780785 1236.86