Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g01411 ATGGCTTCCAAGGTGATGAATCAAAGCATTTTCTTGGCAATCATATGCATTGCTTTCGTTTTGGCTTCAGGGGAAGCAACAATAGATGAAACTAGTTGGTTGTATTGCTCAGCCAAGGGGCATTGTCCAGATGTCAATGCTTGTAACCAGGAATGCTTAGGTAGATCCTTCCATGGGGGTGCTGAGTGGCTGCTTTTTTTTGGCTCAACAATGGGAGGGAATGGCAACAAGGTCTTCACTTTGGCTGAGGTTTCTCAGCACAATAATGCCAAAGACTGTTGGCTTGTCATTCATGGCAAGGTTTATAATGTGACGAAGTTCTTGGAGGACCACCCTGGTGGTGATGATGTCCTGTTGTCTTCCACTGGGAAAGATGCAACTAATGATTTTGAGGATATTGGTCACAGCACCAGCGCCGTGGCCATGATGGATGAGTTCTATGTTGGAGACATTGATACATCAACTTTCCCCAACAAGTTTAAGTACACTCCTCCCAAACAACCTCACTATAACCAAGACAAGACACCAGAGTTCATCATCAAGATCCTCCAGTTTCTAGCTCCCTTGTTTATCTTGGGTTTGGCAGTTGGTATTCATTTCTACACCAAATCAACATGA 618 0.4417 MASKVMNQSIFLAIICIAFVLASGEATIDETSWLYCSAKGHCPDVNACNQECLGRSFHGGAEWLLFFGSTMGGNGNKVFTLAEVSQHNNAKDCWLVIHGKVYNVTKFLEDHPGGDDVLLSSTGKDATNDFEDIGHSTSAVAMMDEFYVGDIDTSTFPNKFKYTPPKQPHYNQDKTPEFIIKILQFLAPLFILGLAVGIHFYTKST 205
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g01411 205 ProSiteProfiles Cytochrome b5 family, heme-binding domain profile. 76 152 IPR001199 -
Spst4g01411 205 FunFam Cytochrome b5 type B 73 156 - -
Spst4g01411 205 PRINTS Cytochrome B5 signature 139 151 IPR001199 -
Spst4g01411 205 PRINTS Cytochrome B5 signature 111 125 IPR001199 -
Spst4g01411 205 PRINTS Cytochrome B5 signature 101 111 IPR001199 -
Spst4g01411 205 PRINTS Cytochrome B5 signature 126 133 IPR001199 -
Spst4g01411 205 PANTHER CYTOCHROME B5 74 202 - -
Spst4g01411 205 ProSitePatterns Cytochrome b5 family, heme-binding domain signature. 107 114 IPR018506 GO:0020037
Spst4g01411 205 Gene3D - 73 156 IPR036400 -
Spst4g01411 205 Pfam Cytochrome b5-like Heme/Steroid binding domain 80 151 IPR001199 -
Spst4g01411 205 SUPERFAMILY Cytochrome b5-like heme/steroid binding domain 76 162 IPR036400 -
Spst4g01411 205 SMART Cyt_b5_2 79 152 IPR001199 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g01411 Spst-Chr4 51949407 51954860 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst4g01411 71 204 NADPH P450 reductases AT5G48810 67.647 4.21e-66 198
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g01411 K23490 - gmx:100500611 264.618