Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g01410 ATGGGTTCTTGCTGGAGCAGTCGGATGAAGGCAGTGAGCCCTTCCAGTGCTGGGTTCACTTCTAGAAGTGTGAGCAGAGAGGGCTATGACATTCATTCGAGTAGCAGGAACTCATCAGCCTCCATACCCATGACCCCTCGGAGCGAGGGTGAGATCTTACAATCTTCCAATTTGAAAAGCTACAGCTACAATGAGTTAAGAATAGCAACAAAACATTTCAGCCCAGACAATGTCTTAGGGGAGGGTGGATTTGGTTCAGTTTTCAAGGGCTGGATTGATGAACATTCGCTTGCTGTTACCAGGCCGGGAATAGGAATGGTTGTTGCTGTGAAGAGACTTAACCAAGAGGGGTTCCAAGGTCACAAGGAATGGTTGGCTGAAATCAACTATCTTGGGCAATTGCAGCATCCTAATCTTGTCAAGCTGATAGGGTACTGCTTAGAGGATCAGCACCGGCTTCTAGTTTATGAATATATGCCTAAAGGCAGCGTGGAGAATCATCTATTCAGGAGGGGATCTCATTTTCAGCAGCTTTCTTGGACTCTAAGATTGAAAATATCCCTTGGGGCTGCTAGGGGTCTTGCTTTTCTCCATAACACAGAAACTAAAGTCATATACCGTGACTTTAAGACTTCTAACATCCTGCTTGATACTAACTATAATGCCAGACTTTCTGATTTTGGGCTGGCCAGAGATGGACCAACTGGTGATAAGAGCCATGTTTCCACAAGGGTCATGGGAACCCATGGATATGCAGCACCAGAGTATCTAGCAACAGGTCACCTCACTGCCAAGAGTGATGTCTATAGTTTTGGAGTGGTTCTTTTGGAAATGTTATCAGGAAGACGAGCCATAGACAAGAACAGGCCATCTGGAGAACAATGCTTAGTTGAATGGGCAAAACCTTACCTTGCAAACAAACGTAGGGTTTTTCGTGTAATGGATAGTCGTCTTGAAGGTCAGTATTCCCTAAACCAAGCTCAAAGAGCAGCCACGCTTGCTTTTCAATGTCTTTCTGTAGAGCCCAAATACAGGCCAAAGATGGATGAGGTGGTGAGAGTATTGGAGCAACTAGGCGAGTCAAATGATGAGGTGAAAAGTGGTGAGCATAAAAGGCGTAGAGCAAGTGGCTCTGGTGGCCATGGCCATCCCAATGGACTCCCTGCATCTGCTAGCATAGGAAGTTCTGTTGGTCCAAAAAAGTTTGCCTATCCAAGGCCTTCTGCTTCTCTCCTTTATGCTTAA 1245 0.4578 MGSCWSSRMKAVSPSSAGFTSRSVSREGYDIHSSSRNSSASIPMTPRSEGEILQSSNLKSYSYNELRIATKHFSPDNVLGEGGFGSVFKGWIDEHSLAVTRPGIGMVVAVKRLNQEGFQGHKEWLAEINYLGQLQHPNLVKLIGYCLEDQHRLLVYEYMPKGSVENHLFRRGSHFQQLSWTLRLKISLGAARGLAFLHNTETKVIYRDFKTSNILLDTNYNARLSDFGLARDGPTGDKSHVSTRVMGTHGYAAPEYLATGHLTAKSDVYSFGVVLLEMLSGRRAIDKNRPSGEQCLVEWAKPYLANKRRVFRVMDSRLEGQYSLNQAQRAATLAFQCLSVEPKYRPKMDEVVRVLEQLGESNDEVKSGEHKRRRASGSGGHGHPNGLPASASIGSSVGPKKFAYPRPSASLLYA 414
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g01410 414 SUPERFAMILY Protein kinase-like (PK-like) 39 355 IPR011009 -
Spst4g01410 414 PANTHER OS01G0588500 PROTEIN-RELATED 37 358 - -
Spst4g01410 414 Gene3D Transferase(Phosphotransferase) domain 1 159 378 - -
Spst4g01410 414 MobiDBLite consensus disorder prediction 1 51 - -
Spst4g01410 414 ProSitePatterns Serine/Threonine protein kinases active-site signature. 204 216 IPR008271 GO:0004672|GO:0006468
Spst4g01410 414 Pfam Protein kinase domain 76 352 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst4g01410 414 ProSiteProfiles Protein kinase domain profile. 73 358 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst4g01410 414 FunFam Serine/threonine-protein kinase BIK1 40 158 - -
Spst4g01410 414 FunFam Probable serine/threonine-protein kinase PBL8 159 374 - -
Spst4g01410 414 Gene3D Phosphorylase Kinase; domain 1 48 158 - -
Spst4g01410 414 MobiDBLite consensus disorder prediction 362 414 - -
Spst4g01410 414 CDD STKc_IRAK 79 358 - -
Spst4g01410 414 ProSitePatterns Protein kinases ATP-binding region signature. 79 111 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g01410 Spst-Chr4 51942580 51945302 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst4g01410 34 363 Glycoside Hydrolase AT3G07070 46.041 3.09e-101 305
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Spst4g01410 Pkinase 5.4e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g01410 - - gmx:100795058 742.651