Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g01393 ATGACACCATATTCTTCGGTGGTGACAAAAGACTCTGTGAGCAGAAAGATAAAAGAAGTTGTTTTGAAAGAGATATCAAGGAAGAGGAATAGACATCATAGAAGTTCAACCATTTCTATGGCTCCAATCAATACGAACAAGAACTTGTTAACAACATTTGTGCAAGATCCAGTCTCTCCTTTGATCTATCACCACCATAAACAACAGGTGTATGGCTCCAAAATGAAATTAACTAGGTCTCTATCATTTCCTCCACCTGACTCATTATCAAAAAGGGAAGGTTCTGAGGCTATAGACAACGGTTTTCAACCAAAAGGGAAAGGAAAATTATGTTTTGACAACAAAACAGCAAAGGCAGGTCAAGTTGAATCATCAAAAAAGTTTTACCTAAGGTCCTTGTCATCAGGAGCAAAATTTTTCAATGTAAATGAAGCGATGATAGCAAGAGATGTTACTTGTTCTTCAGGATCTGTTCAGGATCAAAATCATAATGAAATTAAACAGTTTAAGAATCTGAAACAGAAAATAGAGCATGTTACAGGAGATAGTAAAAAAGAAAAGCTTCGCGTTACTATGGATGCTATGGTTCACAAACTTCCTCAAGGCCATGCGATTTCAATTGATTTGAAGAAAGAATTTTTTAAGAAATTGTCAGATTCTATTATCACTAGAAAAGGGGAACACTATCCTGGAAGATGTAGTGATCACTCTACTTCATTAGCCAAGCCTCACCGGAACAACCTAACAAGAAAATTATCACTTCAAGAACCACTAGAAAGTTATTTTCATTTCAATAAGAATGACTTTAATGCAGAATCAAGTCACCTCCAATCTAACCAACTAAAAATAAGAACAGAAAATGAACATTCACCATTGAGGATGCCGATACCCTTACAAAGAATGCTTTCATTACCTGATCTCCAATCTCTTTCCTGTGCTTATCAGGATTGGGAGTTTCCTGAAATTTCATCTGTAACTGAGCCCAAGCCAAAAGGGGCTTCTAGGGATGGAACTGTGAGTTCAGAGAATATTTCCTACCAGAAAAAGAGTCTTGACCTTAATTTACATTCAAGTAGTCAGCTTCAGTTAGATACAACTGTAGAAAATTTGATTCAAAAATACCTTGTCAGTGTAGATGAAAATGATCTTGTGATTAGTAATATTGTTGAACAAGGATCAGACTGTAGCAGTGAGATTAATGGCAAAGCGGGCATGTCAACTGATGATTTTGGATACATTTGTTTAAAAAATGATGGCACCTTTAATGACCAAGATATTGAGCCAACAAAAAGCAAGACTGCAGTAGAAGAATCAGATTCAAAATTGATTACCGAAGCCGGCAACAATCTGGATAACATGACTGAGGTAAAAAAGGCAATCATGGATAATTCCCTTGAAGTTAAAGAGACCATAGAGAATGCTCAAATAGTGGAGATTAAAAGCAAGCAGTTGAATTATGACATTCCTCTTTTCCATATTAACATCAGAGACAAAGCTGAGTTTAAGTATGTGAAATATGTACTTGAGATATCTGGACTAACTGGTAAAGAGTGCCTTTTAGCATGGTATTCAAGTGACCACCCAGTTGATCCATTACTCTATGAAGAAATGGAAAGTGACCTTGATTTCTGTAGTTATGGGGGCAGTGGTCAGTGTAATCACCATGTATTGTTTGATTTAATCAATGAGGCATTGTTAGAAATTTCAGGGAGGTCTTACTGCTACTGTTCTACACCATTGTCATCATCTCATTCTCATCCAATGCCAAAAGGGTGCCACACTCTTCATCAAGTGTGGACTCATATGAACAAGTCCTTGTGCTTGAGATCCAAAGCTGGCCTGACAATAGATGATCATGTAAGTCGAGATCTAGAAAGGCGTGATGGGTGGGTGAGCCCTCAACTCTACGCTCAGTGTGTCAGTTTGGAGCTTGAAGACTTAATTTTACAAGATCTACTGGAGGAAATAGCATTTGACTTAGCATGCATTTAA 1992 0.372 MTPYSSVVTKDSVSRKIKEVVLKEISRKRNRHHRSSTISMAPINTNKNLLTTFVQDPVSPLIYHHHKQQVYGSKMKLTRSLSFPPPDSLSKREGSEAIDNGFQPKGKGKLCFDNKTAKAGQVESSKKFYLRSLSSGAKFFNVNEAMIARDVTCSSGSVQDQNHNEIKQFKNLKQKIEHVTGDSKKEKLRVTMDAMVHKLPQGHAISIDLKKEFFKKLSDSIITRKGEHYPGRCSDHSTSLAKPHRNNLTRKLSLQEPLESYFHFNKNDFNAESSHLQSNQLKIRTENEHSPLRMPIPLQRMLSLPDLQSLSCAYQDWEFPEISSVTEPKPKGASRDGTVSSENISYQKKSLDLNLHSSSQLQLDTTVENLIQKYLVSVDENDLVISNIVEQGSDCSSEINGKAGMSTDDFGYICLKNDGTFNDQDIEPTKSKTAVEESDSKLITEAGNNLDNMTEVKKAIMDNSLEVKETIENAQIVEIKSKQLNYDIPLFHINIRDKAEFKYVKYVLEISGLTGKECLLAWYSSDHPVDPLLYEEMESDLDFCSYGGSGQCNHHVLFDLINEALLEISGRSYCYCSTPLSSSHSHPMPKGCHTLHQVWTHMNKSLCLRSKAGLTIDDHVSRDLERRDGWVSPQLYAQCVSLELEDLILQDLLEEIAFDLACI 663
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g01393 663 Pfam Domain of unknown function (DUF4378) 500 655 IPR025486 -
Spst4g01393 663 PANTHER PROTEIN TRM32 43 660 IPR044257 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g01393 Spst-Chr4 51724726 51726963 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst4g01393 463 649 TRM (TON1 Recruiting Motif) Superfamily AT5G02390 39.048 1.41e-33 135
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g01393 - - gmx:121174644 910.212