Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g01392 ATGGGCAACCGTGTCGGAAAAGCGTGCCTCTGCTCCGCCGGCGTCGGAGATAACTCCCGCCGGCACAACCATAACAACGCCAACCCCTTTGGAAACTCAGTATGCTATGTCCGACCGCCGGACCTTTTCGCCGCCGACGACGTCACCGCCTTCACAACTTTCCGATCAGTTTCCGGCGCCTCCGTCAGCGCCAACTCCTCCACTCCACCTTCCGCCACCTTTGATTCTCTCCACCACAGCGTCACCAATTCCACAGTCGTTTTGGACTCCTCGGCGTCGTTCGAGAGCTCCCCGTCCTTCACGTCGATGCCTCTGCAGCAACAACACGCTTCGCGTGGGGGTGGATCCTCTGCGGGAAGTTGCAACCCAGTGTGGTGGAGCCCCACTGACGGAGGATTCTTTTCCGGCCCTGTTGTGCTTGGTGGTTTGGTGAATGAAAGAGGCTTGAAGAAGAAGCTGCGGAGAAGCTTCTCTCATGACAATGGGTTTGGGCTTGAAGACAGAAGAGAGAAACAAAGCGTGGGGAAGATTCTCAAGAGGGTGATTTCTGGGTCCTTTGTTAAACGGGTGGTTTCCATTGGAGGGTACAAGAAAAAGAATGAAAATGGTATTGATAATGTTGGTGGTGACGATGATGAGGCTAAGTTGGGTTGTGCTTTGAGTTTACATGATGGTGATAATAACAACTATGATCATCGTCCTTATTTTAGTGATGATAATGAAAATTTCGACATTGTTGGAAATTGTTGTAGTGACTTCAAAAATCTTGACATTGTGGCCTCGATTACAGTTGCAGACCCTGATTTGATCGGATGTGAGAATCTAGAATGGGCTCAAGGGAGAGCAGGTGAGGATCGTGTGCATATTGTGATTTCTGAGGAGCATGGGTGGGTTTTTGTGGGAATTTATGACGGGTTCAATGGTCCTGATGCTACTGATTATCTTCTTGATAATCTTTTCTATGCTGTGCATGATGAGCTAAAGGGTATGCTATGCGGCGACAGGTCTGAGGAATTCTTGGGGTTGGAGGAGAAGGTGTTGTTGGGTTTGGTTAAGGGGAGTAATGATTCCTCCAAATTAAGGAATAGAATGGTTAATGGTTGTTGTTCTTCGGCTTTGGATAAAGAAAACTATACACCGGTAAATGAAATGACCAACTTGGATTCTTTGAACGGTTCAAAGAAAATGGGGGGATTAAAAAGTAGAAATGGTTGTGAAGAGTTGATGCAGTTAGAATTAAGTGTTGAAGGTGCATCAACATTTGGCCATTCAGACGTGTTACTAGCTCTTTCTGAGGCGTTGAGGAAGACGGAGGATGCGTTTCTGAAGAAAGTTGATGAAGTGATAGGCAACAATCCTGTGTTGACTATGATGGGGTCTTGTGTTCTGGTGATGCTGATGAAGGGAGAAGATGTTTACTTGATGAATGTGGGAGACAGTCGTGCAATATTGGCCAGTCATAGTGCTAATTCTTCTCTTCAGCTCACCATGGAGCATAGCACACTTGTGAAAGAGGAGGTTCACAGAATCAGGAAGGAGCACCCAGATGATCCTTCTGCAATTAGTAAAGGCCGAGTGAAAGGTTACTTAAATGTTACGAGAGCTTTTGGGGCTGGCTTCCTCAAGCAGCCAAAACAGAATAATGCAGTATTAGAAACTTTCAAAGTTAACTACATAGGGGACTCCCCATACATCATATGTTCCCCTTCACTCTACCATCACAGGCTCAGCCCAAGTGACAGATTCTTGATATTGTGTTCTGATGGACTCCACCAGTACTTCACAAATGAAGAAGCAGTTGCCATTGTGGACTCATTCATCACTTCCTCTCCAGATAGAGATCCTGCACAACTCCTCATAAATGAAGCACTATTTCGAGCAGCCAAAAAAGCTGGTATTGACTTGCATGAATTGCTTGATATCCCACAAGGGGAAAGACGTCTTTATCATGATGACATTTCTATTGTCATAATCTCCTTCAACGGAAAAATATGGCGTTCATCACTTTAA 2010 0.4577 MGNRVGKACLCSAGVGDNSRRHNHNNANPFGNSVCYVRPPDLFAADDVTAFTTFRSVSGASVSANSSTPPSATFDSLHHSVTNSTVVLDSSASFESSPSFTSMPLQQQHASRGGGSSAGSCNPVWWSPTDGGFFSGPVVLGGLVNERGLKKKLRRSFSHDNGFGLEDRREKQSVGKILKRVISGSFVKRVVSIGGYKKKNENGIDNVGGDDDEAKLGCALSLHDGDNNNYDHRPYFSDDNENFDIVGNCCSDFKNLDIVASITVADPDLIGCENLEWAQGRAGEDRVHIVISEEHGWVFVGIYDGFNGPDATDYLLDNLFYAVHDELKGMLCGDRSEEFLGLEEKVLLGLVKGSNDSSKLRNRMVNGCCSSALDKENYTPVNEMTNLDSLNGSKKMGGLKSRNGCEELMQLELSVEGASTFGHSDVLLALSEALRKTEDAFLKKVDEVIGNNPVLTMMGSCVLVMLMKGEDVYLMNVGDSRAILASHSANSSLQLTMEHSTLVKEEVHRIRKEHPDDPSAISKGRVKGYLNVTRAFGAGFLKQPKQNNAVLETFKVNYIGDSPYIICSPSLYHHRLSPSDRFLILCSDGLHQYFTNEEAVAIVDSFITSSPDRDPAQLLINEALFRAAKKAGIDLHELLDIPQGERRLYHDDISIVIISFNGKIWRSSL 669
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g01392 669 PANTHER PROTEIN PHOSPHATASE 2C 257 659 IPR015655 GO:0004722|GO:0006470
Spst4g01392 669 Pfam Protein phosphatase 2C 430 628 IPR001932 -
Spst4g01392 669 MobiDBLite consensus disorder prediction 98 119 - -
Spst4g01392 669 SUPERFAMILY PP2C-like 281 662 IPR036457 -
Spst4g01392 669 ProSiteProfiles PPM-type phosphatase domain profile. 269 660 IPR001932 -
Spst4g01392 669 Gene3D - 260 666 IPR036457 -
Spst4g01392 669 CDD PP2Cc 424 660 IPR001932 -
Spst4g01392 669 SMART PP2C_4 268 658 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g01392 Spst-Chr4 51719068 51722035 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst4g01392 1 667 PP2C-type Phosphatase Gene Family AT2G28890 43.621 5.33e-167 491
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g01392 - K01102 gmx:100794388 598.586