Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g01375 ATGGCAACAGAAATTTTGAAAGAAAATGAGAGAAGAGAACACCTTTTGGAGTATTGGAGGAAGGCAATTACTGAGGCTTTGGACGTCTCAACAGATGCAGTCTTTAAATCCACCTTTAAAATGCTAAAGGCTCATAATCAGATAGAGAGCCTCGTGAAACATTGGAAGGTGGCACTTTGTGAGGCTGCTATCATCTCTAGGTTGATGGTCCTGCATTACAGAGGAAAAAGGGATCATGAGATCAATATGCTCGTGAATGCTAGGGACGCACTTCGTGAGGCTGCTGGCATCTCAGGGGTTGTAGTCCTCAATTCTAGGAATGAAAGCGAGGCTATCAAAAACATCTTGAACAATGTTACAAGTTTGTTGGACAAGACAGAGTTGTTTGTTGCCAATAATCCAGTTGGAGTTGAACCTCGAGTGCAAGAAATTGTTCAGTTGCTAGACCAAAAGCAAGCAAACGATGTTCTACTACTAGGGGTATGGGGGATGGGAGGCATTGGTAAAACAACTATTGCAAAAGCAATTTACAATAAGATTGGCCGTAATTTTGAGGGAAGGAGTTTCCTTGCTGATATTAGGGAAGTTTGGGGGCAAGAGGCTGGCCAAGTTTCTTTACAAGAGCAACTTCTATTTGATATCAACAAAGAAAACAATATAAAGATACGAATGGATCGAAATGATGTTATACATATATTAAATGGTTGTGGTCTTTTCCCAGAGAATGGGATACGTGTCTTGGTAGAGCGAAGTCTTGTAACTGTAGATGATAAGAACAAACTTGGAATGCATGATTTGCTACGGGATATGGGAAGAGAAATTATTCGATCAAAATCACCTATGGTGCTTGAGGAGCGTAGCAGGTTATGGTTTGATGAGGATGTGCTTGATGTGTTATCAAAAGAATCTAAACTCAGGTTGCTTCAACTGTCTGGTGTAGAACTTGTTGGAGATTTTGAAAATCTTTCGAAAGATCTTAGATGGCTTTGTTGGCATGGATTTCCTTTTGCCTTCATACCAACAAGCTTTTATCAAAGAAGTCTAGTTTCTATTGAGTTAGAAAACAGTAAGATTACAATGATGTGGAAGGAGACCCAGCTGATGGAGAAGTTGAAAATTCTTAATCTTAGCCATTCACATTATTTAACAAAGACTCCAGACTTTTTGAATTTGCCTAATCTTGAAAAGCTGGTACTCATAGATTGTCCAAGCCTATCTGAGGTTTCATATACCATTGGACATCTCACTAAAGTTCTCCTAATAAAATTTCAAGATTGTATTAGCCTTCCTAACCTTCCAAAAAGTATCTATAAATTGAAATCTCTTAAAACACTCATTCTTTCTGGATGTTTAATGATTGACAAGTTGGAAGAGGACATAGAACAGATGCAGTCTTTGACGACCCTTATTGCAGATAAGACTGCAATAACAAGAGTGCCCTTTTCAATAGTTAGATCGCAAAGTATTGGATATATTTCATTATGTGGTTTTGAAGGAGTTTCACGCGACGTGTTTCCATCAATCATTTGGTCTTGGATGTCACCAGCAAATAATCTCTCTTGTGTTCAAACATTTGTGGATATGTCATCACTTGTTTATTTAGATGCTCCAAATAGCAGTTCCAATCAGCTATCATATATCACTGAGGAGCTTCCACAGCTTCAAAGTCTTTCGATAGAGTGTGGCTCGGACCTTCAACTTTCTCGAGATACAACAAGTATTTTGGATGCTTTATATAATTCAAATTCTGAAGAATCTGAGTCATCTACAACTACATCACAAATGCAAAATGTATTTACATTGATTGAATGCAAATCAATGTCAAAATGTTTTGTGAAAACACTTTTAATTCAAATGGGAACTAGTTGGGAAATGACCCATGTTCTGAAACAGAGAATTTTACAGAATATGACAAGTAATGACAGTGACTGTTTGCTCCCTGGTGACTGTTATCCAGATTGGTTATCCTTCAGTAGCAACAGTAACAACGGTTCTTCTGTGACTTTTGAAATCCCTCAAGTGAATGGGCGTAACTTGAAGACAATGATGTGCCATATCCATTATTCTTCCCCTGACAATATAACATCAGATGGCCTTAAAAATTTGTTGGTGATAAATCTCACAAAGACCACCATTCAGCTTTTTAAAAGAAACGCATTAGCATCGTTTAAAGATGAGGAATTGCAGAGGGTACTATCAAACATAGAGCCTGGAAACAAGTTTCCACGCAGTAGTTTTGAGTGA 2244 0.3792 MATEILKENERREHLLEYWRKAITEALDVSTDAVFKSTFKMLKAHNQIESLVKHWKVALCEAAIISRLMVLHYRGKRDHEINMLVNARDALREAAGISGVVVLNSRNESEAIKNILNNVTSLLDKTELFVANNPVGVEPRVQEIVQLLDQKQANDVLLLGVWGMGGIGKTTIAKAIYNKIGRNFEGRSFLADIREVWGQEAGQVSLQEQLLFDINKENNIKIRMDRNDVIHILNGCGLFPENGIRVLVERSLVTVDDKNKLGMHDLLRDMGREIIRSKSPMVLEERSRLWFDEDVLDVLSKESKLRLLQLSGVELVGDFENLSKDLRWLCWHGFPFAFIPTSFYQRSLVSIELENSKITMMWKETQLMEKLKILNLSHSHYLTKTPDFLNLPNLEKLVLIDCPSLSEVSYTIGHLTKVLLIKFQDCISLPNLPKSIYKLKSLKTLILSGCLMIDKLEEDIEQMQSLTTLIADKTAITRVPFSIVRSQSIGYISLCGFEGVSRDVFPSIIWSWMSPANNLSCVQTFVDMSSLVYLDAPNSSSNQLSYITEELPQLQSLSIECGSDLQLSRDTTSILDALYNSNSEESESSTTTSQMQNVFTLIECKSMSKCFVKTLLIQMGTSWEMTHVLKQRILQNMTSNDSDCLLPGDCYPDWLSFSSNSNNGSSVTFEIPQVNGRNLKTMMCHIHYSSPDNITSDGLKNLLVINLTKTTIQLFKRNALASFKDEELQRVLSNIEPGNKFPRSSFE 747
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g01375 747 Gene3D Ribonuclease Inhibitor 293 613 IPR032675 -
Spst4g01375 747 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 122 235 IPR027417 -
Spst4g01375 747 SUPERFAMILY L domain-like 296 580 - -
Spst4g01375 747 Pfam NB-ARC domain 139 218 IPR002182 GO:0043531
Spst4g01375 747 PRINTS Disease resistance protein signature 158 173 - -
Spst4g01375 747 PRINTS Disease resistance protein signature 245 259 - -
Spst4g01375 747 PRINTS Disease resistance protein signature 437 453 - -
Spst4g01375 747 Gene3D - 117 278 IPR027417 -
Spst4g01375 747 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 231 591 IPR044974 GO:0006952
Spst4g01375 747 SUPERFAMILY "Winged helix" DNA-binding domain 228 299 IPR036390 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g01375 Spst-Chr4 51378234 51385716 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst4g01375 223 483 WRKY Transcription Factor Family AT4G12020 32.026 1.16e-26 115
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g01375 - - var:108322530 849.736