Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g01372 ATGGAGATTACTAAAGCTATACAACTCCACATGAAGCATTGGAGGGATGCATTTTGTGAGGATGCTGACATCGGAGGGGGTGCAGTCTTAGATTTGGATGATTCCCGTTTTGCAATGTGGTTGGTTCATAAAGAGCTACATCTCCTCACGGCTCTTTGGCGGGACAAGCTTCGGCCTGACAAGCTTGGTAAGGCAGCTGATAAATCAGGGGATGATGAAGATCTATATTCCAGAGAGCATAACCCAGAATTCCTCGTGGAGAGTTGGAGGATGGAAATTGCTAATGCTGTTGACATCTCAAGATGTGCAGTCAGATCCAGATATAAAATGCTAAAGGCTTATAATCAGATAGAGGACCTCGTGAAACATTGGAAGTTCGCACTTTGTGATGCTGCCTGCATCGCGAGGTTGGTAGTCCTGCATTACAGAAGAAAAAAGGATAATGAGATCAACATGCTCGTGAAGCATGCTGGGGACGCACTTTGTGAGGCTGCTGGCATCTCAGGGTTTGTAGTCCTCAATTCTAGGAATGAAAGCGAGGCTATAAAAAAAATCGTTAACAATGTTACAAGTTTGTTGGACAAGACAGAGTTGTTTGTTGCCAATAATCCGGTCGGAGTAGAACCTCGAGTGCAAGAAATGGTTCAGTTACTAGACCAAAACCAATCAGACGATGTTCTACTACTAGGGGTATGGGGAATGGGAGGCATTGGAATGGATCGGAATGATGTTATACATATATTAAATGGTTGTGGACTTTTCCCAGAGAATGGAATACGTGTCTTGGTAGAGCGAAGCCTTGTAACAGTAGATGATAAGAACAAACTTGGAATGCATGATTTGCTACGGGACATGGGAAGAGAAGTTATTCGATCAAAATCACCAATGGTGCTTGAGGAACGAAGCAGGTTATGGTTTCATGAGGATGTGCTTGATGTGTTATCAAAAGAAACTAAACTCAGGTTGCTTCAACTTTCTGGTGTGGAACTTGTTGGAGATTTTGAATATCTTTCGAAAGATCTTAGATGGCTTTGTTGGCATGGATTTCCTTTTGCCTTCATACCAACAAGCTTTTATCAAGGAAGTCTAATTTCTATTGAGTTGGAAAACAGTAAGATTACAATGATGTGGAAGGAGACCCAGAGGATAGGCAAGCTGATGGAGAAGTTGAAAATTCTTAATCTTAGCCATTCACATTATTTAACAAAGACTCCAGACTTTTTGAATTTGCCTAATCTTGAAAAGCTGGTACTCATAGATTGTCCAAGCCTGTCTGAGGTTTCATATACCATTGGACATCTCACCAAAGTTCTCCTACTAAATTTTCAAGATTGTATTAGCCTTCGTAACCTTCCAAGAAGTATCTATAAATTGAAATCTCTTAAAACACTCATTCTTTCTGGATGTTTAAAGATTGACAAGTTGGAAGAGGACATAGAACAGATGGAGTCTTTGACGACCCTTATTGCAGATAAGACTGCAATAACAAGAGTGCCCTTTTCAATAGTTAGATCGCAAAGTATTGGATATATTTCATTATGTGGTTATGAAGGATTTTCACGCGATGTGTTTCCCTCAATCATTTGGTCTTGGATGTCACCAGCAAATAATCTCTCTTCTTGTGTTCAAACATTTGTGGATATGTCATCACTTGTTGCTATAGATGTTCCAAATAGCAGTTCCAATCAGCTATCATATATCACTGAGGAGCTTCCAAAGCTTCAAAGTCTTTCGATAGAGTGTGGCTCGGACCTTCAACTTTCTCGAGATACAACAAGTATTTTAGATGCTTTATATAATTCAAATTCTGAAGAATCAGAGTCATCTACAACTACATCACAAATGCAAAATAATATGCCTACAAGTGATGACAGTGACTGTTTGCTCCCTGGTGACTGTTATCCAGATTGGTTATCCTTCAGTAGCAACAATAACAACGGTTCTTCTGTGACTTTTGAAATCCCTCAAGTGAATGGGCGTAACTTGAAGACAATGATGTGCCACATCCATTATTCTTCCCCTGACAATATAACATCAGATGGCCTTAAAAATTTGTTGGTGATAAATCTCACAAAGACCACCATTCAGCTTTATAAAAGAAATGCATTAGCATCGTTTAAAGATGAGGAGTTGCAGAGGAGGGTACTATCAAACATAGAGCCTGGAAACAAGGTGCAAATTGTTGTTGTTTTCTGGAGCAGATTAACTGTTATCAAGACAACAATTTATCTTATATATGAGCCAATTGATGAAAAAATGGAGCACGAGCCTGCACCAAATAACACTCCAAATAACAATGTAATTGTTCCTAGTTACGAATCTTTATGTGCCGTCAGGTTGATCTCTCCTGAAGTGGAACTCGTGCAGAACTTGAAGTGTGTTTCGGAGAAAAGCTTAACTAAACGCTTATTGAATAAATTCTTACCATGTAAGTACTTTTGTAAAGGAAAAATGGAGAAGAAGAAAAATCAAGGTTAA 2478 0.3923 MEITKAIQLHMKHWRDAFCEDADIGGGAVLDLDDSRFAMWLVHKELHLLTALWRDKLRPDKLGKAADKSGDDEDLYSREHNPEFLVESWRMEIANAVDISRCAVRSRYKMLKAYNQIEDLVKHWKFALCDAACIARLVVLHYRRKKDNEINMLVKHAGDALCEAAGISGFVVLNSRNESEAIKKIVNNVTSLLDKTELFVANNPVGVEPRVQEMVQLLDQNQSDDVLLLGVWGMGGIGMDRNDVIHILNGCGLFPENGIRVLVERSLVTVDDKNKLGMHDLLRDMGREVIRSKSPMVLEERSRLWFHEDVLDVLSKETKLRLLQLSGVELVGDFEYLSKDLRWLCWHGFPFAFIPTSFYQGSLISIELENSKITMMWKETQRIGKLMEKLKILNLSHSHYLTKTPDFLNLPNLEKLVLIDCPSLSEVSYTIGHLTKVLLLNFQDCISLRNLPRSIYKLKSLKTLILSGCLKIDKLEEDIEQMESLTTLIADKTAITRVPFSIVRSQSIGYISLCGYEGFSRDVFPSIIWSWMSPANNLSSCVQTFVDMSSLVAIDVPNSSSNQLSYITEELPKLQSLSIECGSDLQLSRDTTSILDALYNSNSEESESSTTTSQMQNNMPTSDDSDCLLPGDCYPDWLSFSSNNNNGSSVTFEIPQVNGRNLKTMMCHIHYSSPDNITSDGLKNLLVINLTKTTIQLYKRNALASFKDEELQRRVLSNIEPGNKVQIVVVFWSRLTVIKTTIYLIYEPIDEKMEHEPAPNNTPNNNVIVPSYESLCAVRLISPEVELVQNLKCVSEKSLTKRLLNKFLPCKYFCKGKMEKKKNQG 825
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g01372 825 Gene3D - 76 201 IPR035897 -
Spst4g01372 825 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 155 238 IPR044974 GO:0006952
Spst4g01372 825 SUPERFAMILY L domain-like 304 638 - -
Spst4g01372 825 Gene3D Ribonuclease Inhibitor 307 623 IPR032675 -
Spst4g01372 825 MobiDBLite consensus disorder prediction 602 624 - -
Spst4g01372 825 SUPERFAMILY "Winged helix" DNA-binding domain 254 314 IPR036390 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g01372 Spst-Chr4 51318450 51326872 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst4g01372 239 502 WRKY Transcription Factor Family AT4G12020 31.908 1.51e-27 118
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g01372 - - var:108322530 884.019