Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g01370 ATGTCTTCCATTTTTGCCAAGGGATATTCTTTTCTCATCCCCAATTTTGAGGTAGGAGAAGCGGATCGGTTGCCGAAGAAAGTTGCAAAGGACACAAGAATCCATGAAGTGTTTTTGAGTTTCAGAGGGAAAGACACGCGCGCTTCTTTCACGGCGCATCTCTATGCTGCTCTTCGTAACGCGGGAATCCTTGCTTTCAAGGATGATACGTCGCTTCTGAGAGGAGATCACATTTCACCGGCGCTGCTGAAAGCAATCCAAGTGTCTGAAATATCTGTTGTTGTATTCTCGACCAATTATGCAACTTCAGCGTGGTGTATGCAAGAGTTGGAGACGATAATGAAGTGTCATAGAAACACAGGGCAGGTGGTAGTTCCAGTGTTCTATTACGTTGATCCCTCTGAAGTGCGACATCAAACGGGTGGGTTTGGAAGCGCATTTCGAAGCCTTGAGCGCAGGATTTTAGCAGAGGAAAACGAGGTGAGTCTAAGGATGAGCATGTTTAAAAGGAAATTCAACCTCCAGAATTGGAAGGAGGCACTTGCTGAGGCTGCTGGCATCTCAGGGGTGGTAGTTGAATATGCAAGGGATGAAAATGAGGCTATAAAGAACATTGTTGAAAATGTAATACGTTTATTAGACAAGACAGAGTTGTTTGTTGCTGATAATCAAGTGGGAGTAGAATGTAGAATACAAGATATCATTCAGCTACTAGACCTTGAAACTCCTAATAACGTTCTACTACTAGGGATGTGGGGAATGGGAGGCATTGGTAAAACAACCATTGCAAAAGCAGTTTACAATAGGATTGGCCGCAATTTTGAGGGAAAGAAGAGAAGTCTTGTAACAGTTGATGCTAAAAACAAGCTTGGAATGCATGATTTGGTGAGGGACATGGGAAGAGAAATCATTCGTGCAGAGTCACCAAAGGAGCCTGAGATGCGTAGTAGGCTATGGTTTCATGAGGATGTTCTTGATGTACTATCAAAAGAAACTGGAACGAAAGCTATTGAGGGACTGACTTTGAACTTACCAAAAACTAATACACAATGTTTGAGCACTGAAGCTTTTAAAGAGATGAAGAAACTCAGGTTGCTTCAACTTGTGGGTGTACAACTTGATGGAGATTTTAAACATCTTTCCAAATATCTTACATGGCTTTGTTGGCATGAATTTCCTTTAGCATGCATACCAGCAAACTTTTATCAAAGAAGTCTAGTTTCCATTGAGTTAGAAAGAAGCAATGTTACACATCTGTGGGAAAAGGCCCAGATGAAGTTGAAAATTCTAAATCTTAGTCATTCTCATTGTTTAACACAAACACCAGATTTTTCGAATTTGCCTAATCTTGAAAAGTTGATACTCAAAGATTGTTCAAGGTTGTCTGAAGTTTCTCATACCATTGCGCATTTAAATAAAGTTCTTCTAATAAATTTGGAAGATTGTATTAACCTTTGTAACCTTCCCAGAAGTATCTATAAATTGAAAACTCTTGAAACACTCATTCTTTATGGATGTTTAAAGATCGACAAGTTGGAAGAAGACATGGAACAAATGGAATCTTTGACAACGCTCATCGCAGATAAGACTACAATAAAAACAATGCCCTTGTCAATAGTTAGATCAAAAAGCATTCGATACATTTCTTTGTGTGGCTATGAAGGATACTCATGTGATGTATTTCCTTCTATCATTTGGTCTTCAGTGTCACCAACAAATACTCTGTCATCCCGGGTTCAAACATTTGCTAGCAAGCCATTTCTTGTTTCTTCAGATGTACTTAAGACCAGTTCTTCTCACCTATTATGTACTTCCAAGGACCTTCCAAAGCTTCAAAGTCTTGTGATAGAGTTCGAATCAGAAATTCGACTATTTCAAGATGCAAGAAGTATTTTAGATGCTTTATGTGCTACAAAATTTGAGGAATTAGAATCAACTACGTCACAAATGCATGATATGAATGATCTTACATTAATTGGATGCAGCAGACAAGTGGACATGCCAGAATCAAAACGTTCCTTGAGATCGCTTTTAATTCAAATGGGAAGGAGTTCTCAAGTCACCAGTATCTTGAAACAGAAAATTTCACAGGTTTCAGCTCTCTCTCTTCCTCTCTTACACAATATGAGTACTAGTGAGTGGGATGATTGTTTGTTCCCTAATGATAGCTATCCGGATTGGTTAACCTTCGGCAATGAAGGTTCTTCTGTAGTTTTTGAAGTCCCTCGAGTGAACCAACGTACCTTACAGACGATAATGTTCCATATCCACTATTCTTCCCCAGACAATATAACATCAGATGGGCTGAAAAATTTGCTGGTGATAAATCACACAAAGACCACTATTCAACTTTATAAAAAAGATGCATTAATCTCTTTCAAAGATGAGGAGTGGCAGAGGGTGCTACCAAATATAGAGCCTGGTAACAAAGTGGAAGTTGCAGTGTTTTGTGGGAGTAGATTAACAGTGAGCAAGACCATTGTTTATCTCATATATGAGTCAATGGATGAAAAACTGTAG 2520 0.3913 MSSIFAKGYSFLIPNFEVGEADRLPKKVAKDTRIHEVFLSFRGKDTRASFTAHLYAALRNAGILAFKDDTSLLRGDHISPALLKAIQVSEISVVVFSTNYATSAWCMQELETIMKCHRNTGQVVVPVFYYVDPSEVRHQTGGFGSAFRSLERRILAEENEVSLRMSMFKRKFNLQNWKEALAEAAGISGVVVEYARDENEAIKNIVENVIRLLDKTELFVADNQVGVECRIQDIIQLLDLETPNNVLLLGMWGMGGIGKTTIAKAVYNRIGRNFEGKKRSLVTVDAKNKLGMHDLVRDMGREIIRAESPKEPEMRSRLWFHEDVLDVLSKETGTKAIEGLTLNLPKTNTQCLSTEAFKEMKKLRLLQLVGVQLDGDFKHLSKYLTWLCWHEFPLACIPANFYQRSLVSIELERSNVTHLWEKAQMKLKILNLSHSHCLTQTPDFSNLPNLEKLILKDCSRLSEVSHTIAHLNKVLLINLEDCINLCNLPRSIYKLKTLETLILYGCLKIDKLEEDMEQMESLTTLIADKTTIKTMPLSIVRSKSIRYISLCGYEGYSCDVFPSIIWSSVSPTNTLSSRVQTFASKPFLVSSDVLKTSSSHLLCTSKDLPKLQSLVIEFESEIRLFQDARSILDALCATKFEELESTTSQMHDMNDLTLIGCSRQVDMPESKRSLRSLLIQMGRSSQVTSILKQKISQVSALSLPLLHNMSTSEWDDCLFPNDSYPDWLTFGNEGSSVVFEVPRVNQRTLQTIMFHIHYSSPDNITSDGLKNLLVINHTKTTIQLYKKDALISFKDEEWQRVLPNIEPGNKVEVAVFCGSRLTVSKTIVYLIYESMDEKL 839
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g01370 839 Pfam NB-ARC domain 231 307 IPR002182 GO:0043531
Spst4g01370 839 Gene3D - 210 329 IPR027417 -
Spst4g01370 839 Gene3D Ribonuclease Inhibitor 330 569 IPR032675 -
Spst4g01370 839 Gene3D - 33 209 IPR035897 -
Spst4g01370 839 Pfam TIR domain 35 209 IPR000157 GO:0007165
Spst4g01370 839 FunFam Disease resistance protein (TIR-NBS-LRR class) 31 215 - -
Spst4g01370 839 ProSiteProfiles TIR domain profile. 33 213 IPR000157 GO:0007165
Spst4g01370 839 SUPERFAMILY Toll/Interleukin receptor TIR domain 29 189 IPR035897 -
Spst4g01370 839 PRINTS Disease resistance protein signature 493 509 - -
Spst4g01370 839 PRINTS Disease resistance protein signature 248 263 - -
Spst4g01370 839 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 214 305 IPR027417 -
Spst4g01370 839 SMART till_3 34 187 IPR000157 GO:0007165
Spst4g01370 839 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 35 277 IPR044974 GO:0006952
Spst4g01370 839 SUPERFAMILY L domain-like 342 679 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g01370 Spst-Chr4 51311427 51316422 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst4g01370 279 539 WRKY Transcription Factor Family AT4G12020 33.692 1.06e-28 122
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g01370 - - gsj:114406066 771.155