Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g01311 ATGGACCGAAATGATGTTATCCATATATTAAATGGTTGTGGACTTTTCCCAGAGAATGGAATACATGTCTTGGTAGAGCGAAGTCTTGTAACTATAGATGATAAGAGCAAACTTGGAATGCATGATTTGCTAAGAGACATGGGAAGAGAAGTTATTCGTTCAAAATCACCAATGGAGCTTGAGGAGCGTAGTAGGTTATGGTTTCATGAAGATGTGCTTGATGTGTTATCAAAGGAAACTATCTTAAATGGCTTTGTTGGCATGGATTTCCTTTTGCCTTCATACCACCAAGCTTTTATCAAGGAAGTCTAG 312 0.3814 MDRNDVIHILNGCGLFPENGIHVLVERSLVTIDDKSKLGMHDLLRDMGREVIRSKSPMELEERSRLWFHEDVLDVLSKETILNGFVGMDFLLPSYHQAFIKEV 103
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g01311 103 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 8 79 IPR044974 GO:0006952
Spst4g01311 103 SUPERFAMILY "Winged helix" DNA-binding domain 17 76 IPR036390 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g01311 Spst-Chr4 49988319 49989032 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst4g01311 6 67 WRKY Transcription Factor Family AT5G45050 48.387 1.81e-13 62.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g01311 - - var:108322534 155.221