Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g01307 ATGAGACTATATATAGCTCTAGGCATTCGCCTTGCAATTCAATCCTCAGAGTCATCGTTACGAAACAGTTTGTGTAATAAAACACTCACAACACAAGCTATGTTTATTTTCTTCTTCTCTTGTTTACTGTCCCTAGGGTTTCTCCTTCGTTTCTTCAACGGAAAACGACAAGGTTGTTATCACCATAACCATGCACCTCCTTCGCACCCAGTAATTGGATGTCTCGTTTCTTTCTACCAAAACCGCCACCGTCTCCTAGACTGGTACACCCAACACATAGCTCAATCCCCGACCCACACTATCGTCGTGCGCCGCCTCGGCGCGCGTCGCACGGTGGTGACGGCGAATCCCCGCAACGTGGAGTACATTCTGAAGACCAACTTTGGGAACTTCCCCAAAGGCAAGCCCTTCACCGAAATCCTCGGCGATCTTCTCGGGTGCGGGATTTTCAACGTGGACGGCGAGCTCTGGCAGGCGCAGCGCAAGTTAGCGAGTCACGAGTTCAGCACGCGCTCCCTTAAGGACTTCACGGTGAAAACACTCCACGAAGAGGTCCAACACAGGCTTATTCCACTACTTGAGCTTGCTGCACGTGAGAGCCACGTGATCGACCTGCAGGACGTGCTGCGGAGACTCACGTTCGACACGGTGTGCATGGTGTCGCTGGGCTACGACCCCTGCTGCCTGGATCTGAACAAGCCCCTGCCTCCTCTTCTCACGGCGTTCGACAAGGCGTCGGAGGTGAGCGCAGCGCGCGGCGCGGCGCCGGTGTTTCTGGTATGGAAGCTGAAGAGAATGTTGAACGTGGGGTCAGAAAAGGCTTTGAAGGAAGCCGTGAAGCTGGTTCATGAATCGGTGATGAAGATCATAAAAGCAAAGAAAAATGAAATGACATGCAATGGAAGAAAAGGTGGCACTGATTTGCTGGTTCGTTTGCTGGAGGCGGGGCAAGAGGAAACGGCGGTAAGGGACATGGTTATAAGCATGATAATGGCGGGGAGAGACACCACTTCCGCGGCGATGACGTGGCTGTTCTGGTTGTTGTCGAAGCATCGAGAAGAAGAAGCGTTGCTAGTGAAAGAGGTCTATTGTGGAGATAACCGAAGTGAGGGTTTGGATTACGCATGTTTGAAAGAGATGAAGTTGTTGAAGGCGTGTTTGTGTGAGTCGATGAGGCTTTACCCACCGGTGGCGTGGGACTCGAAGCATGCGGGTGGTGCTGACGTGTTACCTGATGGGACACACGTCGGGAAAGGGGATAGGGTGACTTATTTTCCGTACGGAATGGGGAGAATGGAGGCTTTGTGGGGGGAGGATTGTTGTGAGTTTAAACCACAACGTTGGTTTCGTGATGAGAATGTTGATAATGGGGTTCTCAAGTGTGTGGATCCTTACAAGTTTCCTGTGTTTCAGGCAGGTCCAAGAGTGTGTCTTGGGAGGGAAATGGCTTTTATTCAGATGGAGTATGTGGTGGCTTCCATTCTAAACCGTTTTGTTGTTTCGCCAGTCTCTGATGAACACCCCCGTTTTGTTCCTCTTTTAACAGCTCACATGGCTGGAGGATTCAAAGTTAGGATCAACAACAGAACTGGAGCTGGAAGTGAAAAGTGA 1611 0.5096 MRLYIALGIRLAIQSSESSLRNSLCNKTLTTQAMFIFFFSCLLSLGFLLRFFNGKRQGCYHHNHAPPSHPVIGCLVSFYQNRHRLLDWYTQHIAQSPTHTIVVRRLGARRTVVTANPRNVEYILKTNFGNFPKGKPFTEILGDLLGCGIFNVDGELWQAQRKLASHEFSTRSLKDFTVKTLHEEVQHRLIPLLELAARESHVIDLQDVLRRLTFDTVCMVSLGYDPCCLDLNKPLPPLLTAFDKASEVSAARGAAPVFLVWKLKRMLNVGSEKALKEAVKLVHESVMKIIKAKKNEMTCNGRKGGTDLLVRLLEAGQEETAVRDMVISMIMAGRDTTSAAMTWLFWLLSKHREEEALLVKEVYCGDNRSEGLDYACLKEMKLLKACLCESMRLYPPVAWDSKHAGGADVLPDGTHVGKGDRVTYFPYGMGRMEALWGEDCCEFKPQRWFRDENVDNGVLKCVDPYKFPVFQAGPRVCLGREMAFIQMEYVVASILNRFVVSPVSDEHPRFVPLLTAHMAGGFKVRINNRTGAGSEK 536
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g01307 536 PRINTS E-class P450 group IV signature 323 349 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst4g01307 536 PRINTS E-class P450 group IV signature 477 495 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst4g01307 536 PRINTS E-class P450 group IV signature 380 396 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst4g01307 536 CDD CYP86A 100 522 - -
Spst4g01307 536 PANTHER CYTOCHROME P450 49 524 - -
Spst4g01307 536 Gene3D Cytochrome P450 59 533 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst4g01307 536 Pfam Cytochrome P450 66 508 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst4g01307 536 SUPERFAMILY Cytochrome P450 65 529 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst4g01307 536 PRINTS P450 superfamily signature 332 349 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst4g01307 536 PRINTS P450 superfamily signature 477 488 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst4g01307 536 PRINTS P450 superfamily signature 385 396 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst4g01307 536 PRINTS P450 superfamily signature 468 477 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst4g01307 536 FunFam Cytochrome P450 57 532 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g01307 Spst-Chr4 49928573 49930183 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst4g01307 38 530 Cytochrome P450 AT3G48520 59.000 0.0 587
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g01307 K20665 - gmx:100797785 847.425