Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g01303 ATGCCTTCTTCCTCCACCACCATAGTCTCCAAATGTGTCGTCCACCCCGACCACAAATCCAACATCAAACCCCTCAAACTCTCTGTTTCTGACCTCCCAATGTTGTCCTGTCACTACATCCAAAAGGGCGTCTTGCTCACCGCCCCACCCTCTTCCTTCGATGACCTCATTCTCTCTCTCAAACACTCTCTCTCCGCCGCTCTCTCCCACTTCCCCGCCCTCGCCGGCCGTCTCTCCACCGACTCCCAGGGCTACGTCCACATCGTCTGCAACGATGCCGGCGTCGACTTCATCCACGCCAAGGCCAAGCACTTGACTTTAAACGCCGTCGTTTCGCCCTCTCTCGTTGATGTGCATCCCTGCTTCAAGGAGTTTTTTGCCTACGACATGATGATCTCCTACGCCGGCCACCACAACCCTCTCGCCGCCGTCCAGGTAACCGAGCTAGCCGACGCTGTCTTCGTCGGCTGCACTGTCAACCACGCTGTCACCGACGGCACCTCCTTCTGGCACTTCTTCAACACCTTCGCCGCCATCACCAAAGGCGGCGCCGCCAAGAAAGTCCTCCGCGCCCCGGACTTCACTCGCGAAACCGTCGTCAACTCCTCCGCCGTTCTCCACGTCCCTGCCGGCGGCCCCAAACTCACCTTCGACGCCGACCAACCCCTCCGCGAACGCGTCTTCCACTTCTCCCGCGAATCCATTCTGAAACTCAAACTTAGAGCCAACGCCAACACCAACGAACTAACGGAAGTAATGGGAAAACAAGTGAATGACGGTTGGAAAATCGTTAACGGTAACGGTAACGGTAACGGAAACGGAAGAGTTAACGGTAACGGAAGAAACGAGATCTCCTCGTTTCAGTCGTTATCGGCTCAGCTCTGGCGTGCGGTGACACGTGCGAGGAAATTCAACGACCCTGCCAAAACGTCGACGTTTCGCATGGCGGTTAATTTCCGCCACCGTTTGGAGCCGAAGTTGGACGCGTTTTACTTTGGCAATGCGATTCAGAGCATTCCAACCGTCGCAACCGTCGGGGATATTCTCTCACGCGATCTGCGTTTCTGCGCGGAGTTGCTGCACCGGAACGTGATCGCGCACGACGACGCAACGGTGCGCCGCGGCATAGAGGATTGGGAGAACGCGCCGAGACTGTTTCCTCTCGGGAACTTCGACGGCGCGATGATCACCATGGGAAGCTCCCCGCGTTTCCCCATGTACGACAACGACTTCGGCTGGGGAAGGCCCGTTGCGATTCGGAGTGGCAAAGCGAACAAGTTCGACGGCAAGATCTCGGCGTTTCCGGGTAGAGAAGGCAACGGTAGCGTGGATCTGGAAGTCGTTTTGGCTCTGGCTACCATGGACGGGCTCGAAAACGACATGGAGTTTATGCAATACGTAACGCAGGTGGTGTGA 1416 0.5699 MPSSSTTIVSKCVVHPDHKSNIKPLKLSVSDLPMLSCHYIQKGVLLTAPPSSFDDLILSLKHSLSAALSHFPALAGRLSTDSQGYVHIVCNDAGVDFIHAKAKHLTLNAVVSPSLVDVHPCFKEFFAYDMMISYAGHHNPLAAVQVTELADAVFVGCTVNHAVTDGTSFWHFFNTFAAITKGGAAKKVLRAPDFTRETVVNSSAVLHVPAGGPKLTFDADQPLRERVFHFSRESILKLKLRANANTNELTEVMGKQVNDGWKIVNGNGNGNGNGRVNGNGRNEISSFQSLSAQLWRAVTRARKFNDPAKTSTFRMAVNFRHRLEPKLDAFYFGNAIQSIPTVATVGDILSRDLRFCAELLHRNVIAHDDATVRRGIEDWENAPRLFPLGNFDGAMITMGSSPRFPMYDNDFGWGRPVAIRSGKANKFDGKISAFPGREGNGSVDLEVVLALATMDGLENDMEFMQYVTQVV 471
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g01303 471 Gene3D - 6 208 IPR023213 -
Spst4g01303 471 SUPERFAMILY CoA-dependent acyltransferases 60 183 - -
Spst4g01303 471 Gene3D - 221 464 IPR023213 -
Spst4g01303 471 PANTHER FAMILY REGULATORY PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G14730)-RELATED 8 465 - -
Spst4g01303 471 Pfam Transferase family 6 464 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g01303 Spst-Chr4 49705866 49707281 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst4g01303 60 459 Monolignol Biosynthesis Gene Families AT5G48930 26.777 2.26e-33 129
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g01303 - - var:108346317 837.025