Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g01243 ATGGAAGGAGAGAGAAGTGTCAATCCCAATTATGACCTCCAAGTTTCATTCACCAACACCCCTCAAGCCATCCATGAAATGGGTTTTGTCCAATTTGAAGAAAATCAGGTTCTTAGCTTCTTGGCACCCTCAGCTCAATCCCAATCTTCTCAGCTCTCTCAGTCTCTAAACCCTGGTGGCGGCAGTAATACCGTCGCCGCCGCTACCACCACCACTACTTCTGGATCCGTCGCAACAATTGGTTTTAACCATAATGACCTTGTATCCAGAACTTCTTGGAATAATGAACAGGTGAGAACACTGGATCCTAAAGCTGTCAATGATGAAAATTGCACCGGAAATACTAGTGATGGCAGCAACACATGGTGGAGAAGTGCAGGGTCAGAGAAGAACAAGGTGAAAGTGAGGAGGAAGCTGAGAGAGCCACGGTTTTGTTTTCAGACAAGAAGTGATGTGGATGTGCTTGATGATGGTTACAAATGGAGGAAGTATGGTCAGAAAGTTGTGAAGAATAGTCTTCACCCTAGAAGTTACTACCGTTGTACTCACAACAACTGTAGGGTGAAGAAAAGAGTTGAACGACTCTCAGAAGATTGTCGCATGGTGATAACCACGTATGAAGGAAGACACAACCATTCTCCTTGTGATGACTCAAATTCATCGGAACACGAATGTTTCTCCTCTTTTTGA 690 0.4435 MEGERSVNPNYDLQVSFTNTPQAIHEMGFVQFEENQVLSFLAPSAQSQSSQLSQSLNPGGGSNTVAAATTTTTSGSVATIGFNHNDLVSRTSWNNEQVRTLDPKAVNDENCTGNTSDGSNTWWRSAGSEKNKVKVRRKLREPRFCFQTRSDVDVLDDGYKWRKYGQKVVKNSLHPRSYYRCTHNNCRVKKRVERLSEDCRMVITTYEGRHNHSPCDDSNSSEHECFSSF 229
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g01243 229 Gene3D WRKY domain 142 208 IPR036576 GO:0003700|GO:0006355|GO:0043565
Spst4g01243 229 MobiDBLite consensus disorder prediction 210 229 - -
Spst4g01243 229 SUPERFAMILY WRKY DNA-binding domain 147 213 IPR036576 GO:0003700|GO:0006355|GO:0043565
Spst4g01243 229 SMART WRKY_cls 155 214 IPR003657 GO:0003700|GO:0006355|GO:0043565
Spst4g01243 229 FunFam WRKY transcription factor 57 141 215 - -
Spst4g01243 229 MobiDBLite consensus disorder prediction 105 124 - -
Spst4g01243 229 ProSiteProfiles WRKY domain profile. 150 212 IPR003657 GO:0003700|GO:0006355|GO:0043565
Spst4g01243 229 Pfam WRKY DNA -binding domain 156 212 IPR003657 GO:0003700|GO:0006355|GO:0043565
Spst4g01243 229 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 57 216 IPR044810 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g01243 Spst-Chr4 47551922 47558304 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst4g01243 3 229 WRKY Transcription Factor Family AT2G44745 57.872 1.18e-76 228
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Spst4g01243 WRKY 1.6e-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g01243 - - gmx:100800671 395.971