Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g01222 ATGGAGATGAACACAGTGCAGGTTTTGTTGGGAGTAGGTTTGGTGTTGTTGGTGCATGTCTTCAATGTTTTGGTGTTGAGGCCAAGATCAATGAGAGCAAAGCTTCAGAGGCAGGGGATTAAAGGGCCTTCACCTCACTTCTACTTTGGCAACATCCCAGAAATGAAGACCCTTTTGCTTCAAGTTCAGTCAGCACCAACCACTCAAGTCAAAGAGAAAGATGAAGAGGTTTCTCTTTCTCACATGTGGCCTTTCACACTCTTCCCTCATATTCAAGAGTGGATCAAACAATATGGTCCCATGTACTTGTTTTCTTCTGGGTCTATACAGTGGCTATTGGTATCAGATATAGAGATGGTGAAGGAAGTCATCATGCACACTTCTTTGAATCTAGGGAAGCCTACTTATCTGTCCAAAGATATGAGGCCACTGTTGGGAAAAGGCATATTGACATCAAGTGGGCCAATTTGGGCTCATCAGAGGAAGATAATTTCCCCTGAGCTATACCTTGATAAGGTGAAGGGAATGGTTAATCTGATATTGGACTCAACGAATGAAACACTAAGGTCTTGGGAGGGTAGATTTGAGAGTGAGGGAGCAGTATCAGAGATTAAAATTGACGAAGATATGCGAAGTTTGTCAGCTGACATAATTGCCAGAGCTTGTTTTGGGAGCAATTACATTGAAGGAAAAGAAATATTCTCAAAGCTTAGAGATCTTCAAAAGCTCTTGTCCAAGATTCATGTTGGAATTCCAGGCTTTCGATACTTACCAAACAAAAGCAACAGAGAAATGTGGAGATTGGAGAAACAGATAGACTCAAAGATATCAATGCTCATAAAGCAACGCCAGGAGGAAACTCATGAGCAGGATCTTTTACAAATGATACTCGAGGGTGCAAAGAAATGCGAGGGTGGTGATGACTTGTTATCAGATTCCATGTCATGTGACAGGTTTATGATAGATAACTGCAAAAATATATTCTTTGCTGGACATGAGACCACTGCCACCACAGCATCATGGTGCTTAGTGCTGTTAGCTGTGCATCAAGATTGGCAAGATCGTGCCCGAGCTGAGGTGCTTGAAGTTTGTGGAAAAGGTGCTCCAGATGCCAACATGCTTAGAAGCTTGAAAACGTTAACCATGGTGATTCAAGAGACTTTGAGGTTGTATTCACCAGCAACATTTGTTATTAGAACAGCTCTCCAAGATGTGAATCTTAAAGGGGTCTTAATTCCAAAAGGAATGAACATTCAGATTCCACTCTCGGTGCTGCATCATGACCCTCAACTCTGGGGTCCTGATGCTCACAAGTTCAATCCAGAAAGATTTGCAAATGGGGTGCTTGGAGCATGCAAGGTTCCACAAGCTTATATGCCATTTGGAATAGGAGCACGTGTGTGTGTTGGACAGCACTTAGCCATGACAGAACTGAAGGTGATTTTGTCTCTCATTCTGTTGAAGTTTCACTTCTCTCTGTCACCATCTTACTGCCATTCACCTGCCTTCCGTTTGGTCATAGAACCTGGGCAGGGAGTTGTTCTTAGGATGACAAGAATTTGA 1563 0.4274 MEMNTVQVLLGVGLVLLVHVFNVLVLRPRSMRAKLQRQGIKGPSPHFYFGNIPEMKTLLLQVQSAPTTQVKEKDEEVSLSHMWPFTLFPHIQEWIKQYGPMYLFSSGSIQWLLVSDIEMVKEVIMHTSLNLGKPTYLSKDMRPLLGKGILTSSGPIWAHQRKIISPELYLDKVKGMVNLILDSTNETLRSWEGRFESEGAVSEIKIDEDMRSLSADIIARACFGSNYIEGKEIFSKLRDLQKLLSKIHVGIPGFRYLPNKSNREMWRLEKQIDSKISMLIKQRQEETHEQDLLQMILEGAKKCEGGDDLLSDSMSCDRFMIDNCKNIFFAGHETTATTASWCLVLLAVHQDWQDRARAEVLEVCGKGAPDANMLRSLKTLTMVIQETLRLYSPATFVIRTALQDVNLKGVLIPKGMNIQIPLSVLHHDPQLWGPDAHKFNPERFANGVLGACKVPQAYMPFGIGARVCVGQHLAMTELKVILSLILLKFHFSLSPSYCHSPAFRLVIEPGQGVVLRMTRI 520
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g01222 520 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 461 470 IPR017972 GO:0005506|GO:0016705
Spst4g01222 520 Pfam Cytochrome P450 92 496 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst4g01222 520 PRINTS E-class P450 group I signature 319 336 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst4g01222 520 PRINTS E-class P450 group I signature 458 468 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst4g01222 520 PRINTS E-class P450 group I signature 95 114 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst4g01222 520 PRINTS E-class P450 group I signature 339 365 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst4g01222 520 PRINTS E-class P450 group I signature 381 399 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst4g01222 520 PRINTS E-class P450 group I signature 468 491 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst4g01222 520 PRINTS E-class P450 group I signature 213 231 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst4g01222 520 PRINTS P450 superfamily signature 468 479 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst4g01222 520 PRINTS P450 superfamily signature 330 347 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst4g01222 520 PRINTS P450 superfamily signature 382 393 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst4g01222 520 PRINTS P450 superfamily signature 459 468 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst4g01222 520 PANTHER CYTOCHROME P450 FAMILY MEMBER 17 511 - -
Spst4g01222 520 Gene3D Cytochrome P450 28 520 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst4g01222 520 SUPERFAMILY Cytochrome P450 82 518 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g01222 Spst-Chr4 46571526 46574659 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst4g01222 119 517 Cytochrome P450 AT5G24900 47.073 2.45e-134 394
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g01222 K24544 - gmx:100780335 922.154
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst4g01222 4 46571526 46574659 Spst4g01222 4 46571526 46574659 ECH