Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g01218 ATGCAGCTCACTCACCTGTGCTTCATCATGCCCTCAGATTATGATAAACTAGAGCCACTTCACGCAACCCCACAAAAACATAAAGAGACACAAAAAAAAGTTAAGGCCAAAAAAGATCCTCAAGAGGCATGTGGAGGCCATGTTGTTGCTACCCTTCATGGCTCCTTGATAAGGTTGTGTGACACAAAGTGGTGGAACTGTCACTGGAATCTATGCCAACATGGTGCAAGAGAAACCAAGCCGATCAAGGCCTCATCATGTTCGTTTCATGACATGGAGGGCGTGCAACTCTCTTCCAAGATTGAAAATAGCAACAATCCAAGGATTTTCAGCTATGCTGAACTGTACATAGGGTCAAGGGGTTTCTCTGAGGAGGAGGTTCTAGGCAGTGGAGGGTTTGGCAAAGTGTACAAAGCTGTTATGCCTAGTGATGGAACAGTGGTGGCTGTGAAGTGTTGCTTGGCAGGGAAAGGTGGCCAGTTTGAGAAGACTTTTGCAGCAGAACTAGCGGCCGTGGCACACCTTCGCCACAAGAACCTTGTTCCCTTGAGGGGTTGGTGTTTTTTCGAGGATCAACTTTTCCTTGTGTATGACTACATGCCTAATCTCAGCCTTGACCGGGTGCTGTTTCGCAAGAACATGAAGGAAGAGCCACTTGGATGGTTGAGGCGTGGGAAAATTGTGAAGGGTTTGGCATGTGCATTGCATTATTTACATGAGCAGTTGGAGACTCAAATCATTCATAGGGATGTGAAGACCAGCAATGTGATGCTTGATTCCCACTACAATGCTAGGTTGGGGGACTTTGGCTTGGCAAGGTGGCTTGAGCATGAGCTTGAGTATGAGTATGAGACAAGGAAAACATCAACATCAAGCAAGTTTGAGCATTTCAGGTTGAGTGAGACTACAAGGATAGGTGGCACAATTGGGTACTTGCCCCCTGAGAGCTTCCAGAGAAGGAGCATTGCTACCTCAAAATCTGATGTTTTCAGCTTTGGAATAGTTGTGTTGGAGGTGGTGGCTGGCAGGAGGGCCATTGATCTCACATACCCTGATGAGAAAATCATCTTGCTTGATTGGGTCAGAAGGCTTAGTGATGAAGGTAGGCTTGTTGATGCTAGGGACACAAGGCTGATAGACGGTTCCTATAAGGTTTTTGACATGGAGCAATTGATTCACATAAGCCTCTTGTGCACACTCCATGACCCTCAATTGAGGCCAAGCATGAAATGGATTGTTGAAGCACTTTCTGACATATCAAACAACTTGCCAACGCTCCCTTCATTTCACTCGCATCCTATGTACATATCTCTGTCCTCCTCATCTGAGACTAGTCCAAGCAGCTCAAAAGGCACTGGCTCAGGCACAGGAACAGAAAGTTCTACCAATCTTACTAGTTTCAATTCCAAATATGTCACAGCTGCAGGAGATACTATATATGTAACTGCTGAAGCGGAACACAGAGACAGTGGAACTAACTCTTCAAAGAGTAGGAAAAAAAGGATGCATCAGCAGCCATCATTTTCATTGGTTGAAACACCTAGGGAGATACCATTCAAGGAGATAGTTTTGGCCACAGATAACTTCTCAGAGTCCAAAAGGGTGGCTGAGTTAGACTTTGGAACTGCTTACCATGGCATCCTAGATGGCCACTACCATGTCATGGTGAAACGCCTTGGCTTGAAGACATGCCCAGCATTGCGGCAAAGATTTTCCAATGAGCTAAGAAACCTGGCAAAACTGCGGCACAGGAATTTGGTGCAGCTCAGAGGGTGGTGCACTGAGCAAGGAGAGATGCTTGTGGTGTATGATTACTCAGCTAAAAGATTTCTCAGTCACCAACTTCACCATCATAACAATAGTACTAAAAATGTTCATTCTGTCCTCAAATGGCATCATAGGTATAACATAGCGAAATCACTTGCGTCTGCACTTCTCTATCTGCACGAGGAATGGGATGAACAAGTCATTCATAGGAACATAACCTCTTCAGCAGTGACTCTTGAACCTGACATGACCCCAAGGCTAGGTAGTTTTGCTCTGGCCGAGTTTCTGTCAAGGAATGAGCATGGCCATCATGTAATCACCACCAGGAACAAGTCTGTTTGTGGGATTTACGGCTACATGTCACCGGAATATGTGGAATCTGGCGAGGCAACCGTGGCTGCTGATGTTTATAGTTTTGGTGTGGTGGTTCTTGAGATTGTGAGTGGACTTAAGGCTGTGGATTTTAGGCAACCTGAGGTGCTTTTGGTAAAGAAAGTTCATGAATTTGAGATGAGAAAACGATCACTTGAGGCACTGGCAGACATAAGACTAAATGGAGAGTACAATTACAAGGAGTTAATGAGATTGATAAGGTTAGGAGTTGCATGCACCCGTTCTGATCCAAAATTAAGACCAAGCACAAGACAGATAGTGAGCATCCTTGATGGCAACGAGAAATTAATCATGGGGGAGAACATGGAAAGCAGAGAAGATTGGAGAGAAACAAATGCTTGCTCCTTGTCACTGGTTAAGAGGATCCAAGCTCTAGGAATACAATGA 2547 0.4511 MQLTHLCFIMPSDYDKLEPLHATPQKHKETQKKVKAKKDPQEACGGHVVATLHGSLIRLCDTKWWNCHWNLCQHGARETKPIKASSCSFHDMEGVQLSSKIENSNNPRIFSYAELYIGSRGFSEEEVLGSGGFGKVYKAVMPSDGTVVAVKCCLAGKGGQFEKTFAAELAAVAHLRHKNLVPLRGWCFFEDQLFLVYDYMPNLSLDRVLFRKNMKEEPLGWLRRGKIVKGLACALHYLHEQLETQIIHRDVKTSNVMLDSHYNARLGDFGLARWLEHELEYEYETRKTSTSSKFEHFRLSETTRIGGTIGYLPPESFQRRSIATSKSDVFSFGIVVLEVVAGRRAIDLTYPDEKIILLDWVRRLSDEGRLVDARDTRLIDGSYKVFDMEQLIHISLLCTLHDPQLRPSMKWIVEALSDISNNLPTLPSFHSHPMYISLSSSSETSPSSSKGTGSGTGTESSTNLTSFNSKYVTAAGDTIYVTAEAEHRDSGTNSSKSRKKRMHQQPSFSLVETPREIPFKEIVLATDNFSESKRVAELDFGTAYHGILDGHYHVMVKRLGLKTCPALRQRFSNELRNLAKLRHRNLVQLRGWCTEQGEMLVVYDYSAKRFLSHQLHHHNNSTKNVHSVLKWHHRYNIAKSLASALLYLHEEWDEQVIHRNITSSAVTLEPDMTPRLGSFALAEFLSRNEHGHHVITTRNKSVCGIYGYMSPEYVESGEATVAADVYSFGVVVLEIVSGLKAVDFRQPEVLLVKKVHEFEMRKRSLEALADIRLNGEYNYKELMRLIRLGVACTRSDPKLRPSTRQIVSILDGNEKLIMGENMESREDWRETNACSLSLVKRIQALGIQ 848
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g01218 848 Pfam Protein tyrosine and serine/threonine kinase 533 809 IPR001245 GO:0004672|GO:0006468
Spst4g01218 848 ProSitePatterns Serine/Threonine protein kinases active-site signature. 246 258 IPR008271 GO:0004672|GO:0006468
Spst4g01218 848 ProSitePatterns Protein kinases ATP-binding region signature. 128 157 IPR017441 GO:0005524
Spst4g01218 848 SUPERFAMILY Protein kinase-like (PK-like) 502 810 IPR011009 -
Spst4g01218 848 FunFam Receptor like protein kinase S.2 489 605 - -
Spst4g01218 848 PANTHER - 86 418 - -
Spst4g01218 848 SUPERFAMILY Protein kinase-like (PK-like) 105 445 IPR011009 -
Spst4g01218 848 FunFam Receptor like protein kinase S.2 95 199 - -
Spst4g01218 848 FunFam Receptor like protein kinase S.2 607 833 - -
Spst4g01218 848 Gene3D Phosphorylase Kinase; domain 1 94 199 - -
Spst4g01218 848 Gene3D Transferase(Phosphotransferase) domain 1 200 423 - -
Spst4g01218 848 ProSiteProfiles Protein kinase domain profile. 529 816 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst4g01218 848 CDD STKc_IRAK 540 812 - -
Spst4g01218 848 SMART serkin_6 122 435 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst4g01218 848 ProSiteProfiles Protein kinase domain profile. 122 435 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst4g01218 848 MobiDBLite consensus disorder prediction 483 510 - -
Spst4g01218 848 MobiDBLite consensus disorder prediction 440 463 - -
Spst4g01218 848 FunFam Receptor like protein kinase S.2 200 422 - -
Spst4g01218 848 Pfam Protein kinase domain 123 347 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst4g01218 848 Gene3D Phosphorylase Kinase; domain 1 489 605 - -
Spst4g01218 848 Gene3D Transferase(Phosphotransferase) domain 1 610 833 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g01218 Spst-Chr4 46552670 46555216 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst4g01218 513 816 Receptor kinase-like Gene Family AT5G59270 37.377 2.47e-54 198
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Spst4g01218 PK_Tyr_Ser-Thr 7.5e-29 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g01218 - - gmx:100781955 1479.92