Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g01213 ATGTCCGTCTCTGTTTTTACCTATTGTGGTTCCTTTTGCATGTCCTATGTACCTGCGAAGTTGTTGATCTGGGACTGTGGTAATGATGGTAATGGTCTAAATGGTTATGCAATGAATTGCTTTTACTATTTCAGAGACAAATCTAGGAACAGAAAGCAAAGGTCAGCACCTGAACTTAAAGAGCAAGTGAAACTCGACTTTTCAGGGGCTGAAAGGGTCACCAAGTCTTCATGCTCATCTGCGTCACCTCGCGGTATACCAGAACTGTATGAGGAGAAGGGTCACAGTCTGAGGGTCTTCTCCTTCTCAGAGCTCAGGCATGCAACAAGTGATTTCAACAGGCTTTTTAAGATTGGAGAAGGTGGATTTGGAAGTGTCTTTAAAGGTTCAGTCAAGCCTGCTGATGGGAATGGGAATCCTATTATAGTTGCTGTCAAAAGGCTCAACAAGGATGCATTACAGGGTCATAAGCAATGGTTGACTGAAGTTCAGTTTCTTGGTGTTGTGGAACACCCAAATCTCGTGAAGCTTATTGGATACTGTGCTTTGGATGATGAACGAGGCATCCAGAGACTACTCGTGTATGAATACATGCCCAACAAAAGCTTAGAGTTTCATCTTTTCAATAAAGCATATTATCCTCTTCCTTGGAAAACAAGACTTGAAATAGCACTTGGAGCAGCTCAAGGGTTAACTTATCTTCATGAAGAATTAGAAATTCAGGTAATATATCGAGATTTTAAATCATCAAATGTATTACTGGATGACGACTTTAAGCCAAAGCTTTCTGATTTTGGACTTGCTAGGGAGGGGCCAGTAGCTGGCGATACTCATGTTTCAACAGCTGTGATGGGAACATATGGTTATGCAGCTCCAGATTACATTGAGACAGGCCATCTCACAGCCAAGAGTGATGTGTGGAGTTTTGGGGTGGTGCTATATGAAATGCTTACTGGCAGGCGTTCAATGGAAAGAAACAGGCCTAAATCAGAGAAGAAACTGGTGGAGTGGGTGAAGCAATACCCTCCTGATAGCAAGAAGTTTGACACAATAATCGATCCGCGTCTTGAAGGAGAGTATTCCATCAATGGAGCGCGAAAACTCGCCAAACTCGCCGATCATTGCCTGCGAAAGAGTGCAAAAGATCGGCCAACGATGAGGCAGGTGGTGGAGAGACTGAAGCAGATAATCCAAGATTCTGATGTAGAGCACCCTGCAGATGACAAAAGTGTTGAGGTATCCGAAGGTGATCAAGTTGAAGCTGAAGTGAAGGGAAATCAATCAAGTTCTTCAGAGTTGTGGAAGAAGAGGATGGAACATCTTGCAAAACTTGGTGAACGTGTGGAGAGTACCAGTAGAAGAAAACTTATGATCCTTCAGAGAGCCAATGTGTCCTCATAG 1401 0.4333 MSVSVFTYCGSFCMSYVPAKLLIWDCGNDGNGLNGYAMNCFYYFRDKSRNRKQRSAPELKEQVKLDFSGAERVTKSSCSSASPRGIPELYEEKGHSLRVFSFSELRHATSDFNRLFKIGEGGFGSVFKGSVKPADGNGNPIIVAVKRLNKDALQGHKQWLTEVQFLGVVEHPNLVKLIGYCALDDERGIQRLLVYEYMPNKSLEFHLFNKAYYPLPWKTRLEIALGAAQGLTYLHEELEIQVIYRDFKSSNVLLDDDFKPKLSDFGLAREGPVAGDTHVSTAVMGTYGYAAPDYIETGHLTAKSDVWSFGVVLYEMLTGRRSMERNRPKSEKKLVEWVKQYPPDSKKFDTIIDPRLEGEYSINGARKLAKLADHCLRKSAKDRPTMRQVVERLKQIIQDSDVEHPADDKSVEVSEGDQVEAEVKGNQSSSSELWKKRMEHLAKLGERVESTSRRKLMILQRANVSS 466
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g01213 466 PANTHER OS01G0588500 PROTEIN-RELATED 63 397 - -
Spst4g01213 466 Pfam Protein kinase domain 114 391 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst4g01213 466 CDD STKc_IRAK 118 396 - -
Spst4g01213 466 MobiDBLite consensus disorder prediction 398 432 - -
Spst4g01213 466 ProSitePatterns Protein kinases ATP-binding region signature. 118 146 IPR017441 GO:0005524
Spst4g01213 466 ProSiteProfiles Protein kinase domain profile. 112 397 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst4g01213 466 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 198 407 - -
Spst4g01213 466 SUPERFAMILY Protein kinase-like (PK-like) 95 403 IPR011009 -
Spst4g01213 466 Gene3D Transferase(Phosphotransferase) domain 1 198 421 - -
Spst4g01213 466 ProSitePatterns Serine/Threonine protein kinases active-site signature. 242 254 IPR008271 GO:0004672|GO:0006468
Spst4g01213 466 Gene3D Phosphorylase Kinase; domain 1 87 197 - -
Spst4g01213 466 MobiDBLite consensus disorder prediction 398 419 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g01213 Spst-Chr4 46379459 46385517 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst4g01213 98 434 Glycoside Hydrolase AT3G07070 45.559 6.18e-93 286
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Spst4g01213 Pkinase 3.7e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g01213 - - gmx:100784625 754.977