Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g01186 ATGCAAATTCTTTTGGTTGACATGGTGATTGTACCAGCAACAACTGGGCAGATGGGTGTTCTGCCAGGACATGTGGCAACAATTGCTGAGTTGAAACCTGGTGTGCTCTCCGTACATGAAGGGAACGATGTGACAAAGTATTTTGTGAGCAGTGGGTTCGCATTCATCCATGGAAACTCAGTGGCTGATATAGTAGCTGTTGAGGCTGTGCCAGTAGATCGAATTGATGTCAATCTTGTCCAGAAGGGCCTTCAAGATTTCACTCAGAAGCTCAACTCAGCCTCCACTGATTTGGAGAAAGCTGAAGCTCAGATTGGTGTTGACGTCCATAGCGCTCTCAACTCTGCTCTTACAGGCTGA 360 0.4694 MQILLVDMVIVPATTGQMGVLPGHVATIAELKPGVLSVHEGNDVTKYFVSSGFAFIHGNSVADIVAVEAVPVDRIDVNLVQKGLQDFTQKLNSASTDLEKAEAQIGVDVHSALNSALTG 119
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g01186 119 Gene3D - 76 118 - -
Spst4g01186 119 PANTHER ATP SYNTHASE DELTA/EPSILON CHAIN 6 119 IPR001469 GO:0015986|GO:0045261|GO:0046933
Spst4g01186 119 CDD F1-ATPase_delta 6 112 IPR001469 GO:0015986|GO:0045261|GO:0046933
Spst4g01186 119 Coils Coil 84 104 - -
Spst4g01186 119 Gene3D - 3 75 IPR036771 -
Spst4g01186 119 SUPERFAMILY Epsilon subunit of F1F0-ATP synthase N-terminal domain 6 70 IPR036771 -
Spst4g01186 119 Pfam ATP synthase, Delta/Epsilon chain, beta-sandwich domain 6 61 IPR020546 GO:0015986
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g01186 Spst-Chr4 45670149 45670644 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst4g01186 6 119 Primary Pumps ATPases AT5G47030 78.070 5.12e-64 191
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g01186 K02134 - gmx:100780778 217.238