Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Spst4g01184 | ATGGCATCAACATTTCTCACCGTACCAACACCCTTCCTACACAAAACCAATGCCATCTCTTTCTCTAACAAGAGACCCTCATTTTTGCAGAGGGGCTCACTGAAGGTCAATGCGATTGCTAAAAAATGGGAACCTACAAAGGTTGTGCCTCAGGCTGATAGAGTTCTTATTCGTTTGGAGGATCCATCAGATAGAACAGCAGGGGGAGTTTTGCTGCCCAAATCAGCTGTGAAGTTTGAGCGATATCTTGTGGGAGAAATCCTAAATGTTGGTGCTGACGCTGGTGAACTAAAGGCTGGAACAAAGGTACTATTCACTGACATGAGTGCTTATGAGGTGGATTTGGGGACTGATGCAAAGCACTGCTTCTGTAAAGCAAGTGACTTGTTGGCTGTGGTTGAGTAG | 405 | 0.4543 | MASTFLTVPTPFLHKTNAISFSNKRPSFLQRGSLKVNAIAKKWEPTKVVPQADRVLIRLEDPSDRTAGGVLLPKSAVKFERYLVGEILNVGADAGELKAGTKVLFTDMSAYEVDLGTDAKHCFCKASDLLAVVE | 134 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Spst4g01184 | 134 | Pfam | Chaperonin 10 Kd subunit | 47 | 133 | IPR020818 | GO:0005524|GO:0006457|GO:0044183 | |
Spst4g01184 | 134 | FunFam | 10 kDa chaperonin | 43 | 134 | - | - | |
Spst4g01184 | 134 | CDD | cpn10 | 47 | 133 | IPR020818 | GO:0005524|GO:0006457|GO:0044183 | |
Spst4g01184 | 134 | SUPERFAMILY | GroES-like | 47 | 134 | IPR011032 | - | |
Spst4g01184 | 134 | SMART | Cpn10_2 | 47 | 133 | IPR020818 | GO:0005524|GO:0006457|GO:0044183 | |
Spst4g01184 | 134 | PANTHER | 10 KDA HEAT SHOCK PROTEIN | 46 | 132 | IPR020818 | GO:0005524|GO:0006457|GO:0044183 | |
Spst4g01184 | 134 | Gene3D | GroES chaperonin | 43 | 134 | IPR037124 | GO:0006457 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Spst4g01184 | Spst-Chr4 | 45625872 | 45628848 | Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Spst4g01184 | 15 | 134 | Calmodulin-binding Proteins | AT5G20720 | 25.000 | 2.10e-10 | 54.7 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Spst4g01184 | K04078 | - | gmx:100306026 | 246.128 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Spst4g01184 | 4 | 45625872 | 45628848 | Spst4g01184 | 4 | 45625872 | 45628848 | ECH |