Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g01131 ATGGAGGTGGTGGAAAATGGTGGTGTTAATCTAAAGGGGTTGAGCAAGGAGATGAGACATGGCAGAACAGCCCATAACATGTCGTCTTCTTCGTTGCGCAAGAAATCTGACCTAGCTCTTGTGTCTAAGGTTCGTTCTGGTCCTCTCAAAAACGTGTTGCTGAACATTCAAGAGGTTATTTTGGGAACCAAGCTCTCTATTCTCTTCCCAGCCATTCCTCTTGCCATAGTTGCTAAATGCTATGGATTTGCAAGAATTGCTTGTTACACTGGTCCCACAGTGGGAGGACTTTTGAATGCAACATGTGGGAATGCTACAGAGCTCATCGTAGCAATTTTTGCCCTTAGCCAAAACAACATTGCTTTGGTCAAATATTCTCTCCTGGGTTCTGTAATTTCCAACCTTCTTCTGGTTCTTGGAACCTCTCTACTCTGTGGTGGCCTTGTAAACCTCAGACAGGAGCAGAAATATGATAGAAGACAGGCAGATATGAATTTGCTTATGCTGTTTTTGGCATTGCTGTGCCACTTGCTGCCAATGCTGTTCCATTACAGTGGTGTCGCGGAAGGTGTCACTACAGAGTCTTCTCTGCAGTTTTCAAGAGCTGCTAGCGTTGTCATGGTGATAGCATATGTTGCCTACCTTGTGTTCCAACTGCGGACTCATAGGCAACTATTTGAAGCCCCTGATGAAAATGAAGAGGGTGGCAATAATTCAGAAGAATCAGTGATAGGATTCTGGAGTGGGTGTGCTTGGCTGGTTGGGATGGCAGTGAGCATTGCAGTGCTGTCTGAATATGTGGTGCAAACAATTGAGGCTGCATCTAATTCATGGGGTTTGTCTGTTAGCTTCCTCAGTGTAATCTTGCTTCCAATAGTTGGCAATGCAGCTGAACATGCTGGAGCAATCATATTTGCTTTCAAAAACAAACTGGACATCTCCTTGGGTATTTCCTTAGGTTCTGCAACTCAAATTAGCATGTTTGTGGTTCCCCTTTGTGCGATTGTTGCTTGGATTCTTGGAATTAAAATGGACCTCAACTTCAACCTCCTAGAGACAGTTTCTCTTGCTTTGGCAATAATAATCACAGCTTTCACATTGCAGGATGGAACTTCTCACTACATGAAAGGTCTTGTTCTCTTTCTGTGCTACATTGTGATCGGGGCATGCTTTTTTGTACAGAGAACACCCTCCAGTGAGCATAACGAAAGTAATGTTTCTAATATGAAGCTCCAATCAGCAAGTGGAGTTTATATAGCTTAA 1263 0.4355 MEVVENGGVNLKGLSKEMRHGRTAHNMSSSSLRKKSDLALVSKVRSGPLKNVLLNIQEVILGTKLSILFPAIPLAIVAKCYGFARIACYTGPTVGGLLNATCGNATELIVAIFALSQNNIALVKYSLLGSVISNLLLVLGTSLLCGGLVNLRQEQKYDRRQADMNLLMLFLALLCHLLPMLFHYSGVAEGVTTESSLQFSRAASVVMVIAYVAYLVFQLRTHRQLFEAPDENEEGGNNSEESVIGFWSGCAWLVGMAVSIAVLSEYVVQTIEAASNSWGLSVSFLSVILLPIVGNAAEHAGAIIFAFKNKLDISLGISLGSATQISMFVVPLCAIVAWILGIKMDLNFNLLETVSLALAIIITAFTLQDGTSHYMKGLVLFLCYIVIGACFFVQRTPSSEHNESNVSNMKLQSASGVYIA 420
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g01131 420 FunFam Vacuolar cation/proton exchanger 92 236 - -
Spst4g01131 420 Pfam Sodium/calcium exchanger protein 252 387 IPR004837 GO:0016020|GO:0055085
Spst4g01131 420 Pfam Sodium/calcium exchanger protein 88 219 IPR004837 GO:0016020|GO:0055085
Spst4g01131 420 NCBIfam calcium/proton exchanger 82 392 IPR004798 GO:0006816|GO:0015369
Spst4g01131 420 NCBIfam calcium/proton exchanger 86 392 - -
Spst4g01131 420 PANTHER VACUOLAR CALCIUM ION TRANSPORTER 19 396 IPR004713 GO:0006812|GO:0008324|GO:0016020
Spst4g01131 420 FunFam Vacuolar cation/proton exchanger 237 393 - -
Spst4g01131 420 Gene3D - 92 246 IPR044880 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g01131 Spst-Chr4 44449985 44453754 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst4g01131 3 400 Antiporters AT2G38170 62.471 4.79e-178 503
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g01131 K07300 - gmx:100782052 609.757