Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g01124 ATGGCCACAGCAACGGCAACGGCAGCAACGTCCTCCTTCATGGGGACGCGCCTCCTGGACGCGCATTCCGCCTCGGGGAGGGTCCAGGCTCGCTTCGGGTTCGGCTCCAAGAAGAAGGTGGCGCCCAAGAAGGTGTCGAAGGGCTCCGGCTCGGGCTCCGACAGGCCGCTGTGGTACCCCGGCGCGAAGGCCCCCGAGTGGCTTGACGGGAGCCTGGTCGGGGACTACGGGTTCGACCCCTTCGGGCTCGGGAAGCCCGCGGAGTATTTGCAGTTTGAGCTGGACTCCCTGGACCAGAACCTGGCGAAGAACGAGGCCGGGGTCATCATCGGCACGAGGACTGAGACTGCTGACGTGAAGTCCACGCCGTTCCAACCCTACAGCGAGGTCTTCGGACTCCAGAGGTTCCGCGAGTGCGAGCTCATCCACGGACGCTGGGCCATGCTCGCCACGCTCGGGGCCCTCACTGTCGAGTGGCTCACCGGTGTCACGTGGCAGGACGCCGGCAAGGTGGAGCTAGTAGAAGGGTCATCATACCTTGGGCAGCCACTTCCATTCTCAATCACCACTTTGATTTGGATCGAGGTTCTGCTCATTGGGTACATAGAGTTTCAGAGGAACGGAGAACTTGACCCAGAAAAAAGGTTGTACCCAGGTGGCAGCTTCTTCGATCCTCTTGGTTTGGCCTCAGACCCAGAGAAGAAAGCCACTCTTCAATTGGCAGAGATCAAGCACGCTCGTCTGGCCATGGTGGGCTTCTTGGGCTTTGCAGTCCAAGCTGCTGCCACTGGCAAGGGCCCACTTAACAACTGGGCTACCCACTTGAGTGACCCTCTTCACACAACCATCATTGACACCTTCTCATCATCCTCTTAA 876 0.5993 MATATATAATSSFMGTRLLDAHSASGRVQARFGFGSKKKVAPKKVSKGSGSGSDRPLWYPGAKAPEWLDGSLVGDYGFDPFGLGKPAEYLQFELDSLDQNLAKNEAGVIIGTRTETADVKSTPFQPYSEVFGLQRFRECELIHGRWAMLATLGALTVEWLTGVTWQDAGKVELVEGSSYLGQPLPFSITTLIWIEVLLIGYIEFQRNGELDPEKRLYPGGSFFDPLGLASDPEKKATLQLAEIKHARLAMVGFLGFAVQAAATGKGPLNNWATHLSDPLHTTIIDTFSSSS 291
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g01124 291 Gene3D Chlorophyll a/b binding protein domain 58 291 - -
Spst4g01124 291 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 4 286 IPR001344 GO:0009765|GO:0016020
Spst4g01124 291 FunFam Chlorophyll a-b binding protein, chloroplastic 111 289 - -
Spst4g01124 291 Pfam Chlorophyll A-B binding protein 64 260 IPR022796 -
Spst4g01124 291 SUPERFAMILY Chlorophyll a-b binding protein 50 288 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g01124 Spst-Chr4 44363438 44364888 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst4g01124 1 290 Chloroplast and Mitochondria Gene Families AT3G08940 83.505 3.94e-173 478
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g01124 K08915 - gmx:100785180 534.258