Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g01108 ATGTGTATTAGAATCCTAGGAGCTAGTAATCGACGATATGCTTATATTGGCGACATTGTTGTTGCTGTAATCAAACAAGCAGTACCAAATACGAACTTAGAAAGATCAGAAGTGATCCGAGCTGTAATTGTACGTACTTGTAAAGAACTAAAACGTAGCAACGGTATAATAATTCAGTATGATGATAATGCTGCAGTTGTCATTGATCAAGAAGGAAATCCAAAAGGAACTCGAATCTTTTGCGCAATCGCCCGAGAATTGAGACAGTTAAATTTCACTAAAATAGTTTCATTAGCACCCGAGGTATTATAA 312 0.3622 MCIRILGASNRRYAYIGDIVVAVIKQAVPNTNLERSEVIRAVIVRTCKELKRSNGIIIQYDDNAAVVIDQEGNPKGTRIFCAIARELRQLNFTKIVSLAPEVL 103
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g01108 103 Hamap 50S ribosomal protein L14 [rplN]. 2 103 IPR000218 GO:0003735|GO:0005840|GO:0006412
Spst4g01108 103 NCBIfam 50S ribosomal protein L14 1 103 IPR005745 GO:0003735|GO:0006412|GO:0015934
Spst4g01108 103 Pfam Ribosomal protein L14p/L23e 1 103 IPR000218 GO:0003735|GO:0005840|GO:0006412
Spst4g01108 103 ProSitePatterns Ribosomal protein L14 signature. 41 67 IPR019972 -
Spst4g01108 103 PANTHER 50S/60S RIBOSOMAL PROTEIN L14/L23 1 102 IPR000218 GO:0003735|GO:0005840|GO:0006412
Spst4g01108 103 SUPERFAMILY Ribosomal protein L14 1 103 IPR036853 GO:0003735|GO:0005840|GO:0006412
Spst4g01108 103 FunFam Ribosomal protein L14 33 103 - -
Spst4g01108 103 SMART Ribosomal_L14_2 1 103 IPR000218 GO:0003735|GO:0005840|GO:0006412
Spst4g01108 103 Gene3D Ribosomal protein L14 1 103 IPR036853 GO:0003735|GO:0005840|GO:0006412
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst4g01108 14 99 Cytoplasmic Ribosomal Protein Gene Family AT3G04400 36.047 1.32e-12 57.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g01108 K02874 - gmx:3989333 201.445