Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g01066 ATGCTCTCCACATTGTTCTTACCAGTTGTTCTCTGTCTTATTTTTCCTGTGCTTTTCTTGTTCTTCATCAACAGTCTCAGAACCTTCAAGAACTCACCCTGTCCTCCAGGTCCTCAAGGCCTTCCAATTATAGGAAATTTACATCAGTTAGATAACTCCATTCTTTATCTGCAGCTATGGCAACTCTCAAAGAAATATGGTCCTATATTCTCCCTTCAATTTGGGTTAAGACCAGCTATTGTTATTTCTTCCCCTAAACTGGCCAAAGAGATACTCAAAATTCATGACCTTGTGTTTAGTGGACGACCTAAATTATGTGGCCAACAGAAACTGTCCTATAATGGATCAGAGATTGCCTTTTCCTCATACAATGAATATTGGAGAGAAATCAGAAAAATTTGTGTTGTCCATATCTTCAGCTCCAAGCGTGTGTCAACCTTTTCCTCTATAAGAAAGTTTGAGGTGCAACAGATGATAAAAAGAATATCTGGGCATGCCTCTTCTGCGGGTGTTACAAACTTGAGTGAGTTACTACTTTCTTTCTCAAGCACTGTAATGTGTAGACTCGCTTTTGGGAGAAGGTACGAGGAAGAAGGAAGTGAAAAGAGTAGGTTCCATGAGTTGCTGAAGGAGCTTCAGGCCATGATGGGCTCCTTCTTCATCTCTGATTATATTCCGTTCATGGGTTGGGTTGACAAACTGAGAGGATTGCATGCACGTCTTGATCGAAACTTCAAGGACTTTGATAGGTTCTACCAAGATGTCATTGAAGAACACATGGATCCCAACAGAGAACGTGCAGATCAACAGGATATGGTTGATGTCTTGCTTCAGCTCAAGAATGACCGTTCGCTTTCAATAGATATCACTTTTGATCACATCAAAGGGGTCCTCATGAACATTCTTGCAGCAGGGACAGATACCACTGCAGCCACATTAGTTTGGACTATGACTGCCCTCGTAAGAAACCCTAGAGTAATGAAGAAAGTTCAAGAGGAAATCAGAAACTTGGGAGGTAAAAAATATTTCTTAGATGAAGATGACATTCAGAAACTTTCCTATTTGAAGGCTGTGATAAAAGAGGCATTGAGATTGTACCCACCAGGCCCACTGCTTGTACCAAGAGAATCAAATGAAGACTGCATTATTAGTGGCTACCGAGTTCCAGCCAAGGCAATTGTGATCGTGAATGCTTGGGTTATTCATAGAGATCCAGAAGCTTGGAAAAATCCTGAGGAGTTTTACCCAGAAAGATTCTTAGACTGTGCTATAGATTTTCATGGACAAGATTTCGAACTAATTCCTTTTGGATCAGGTCGTAGAATTTGCCCAGGTATAGCTATGGCGGTTGTGACACTAGAATTAGTCCTTGCTAATCTTCTTCGTTCCTTTGATTGGGAATTGCCTCAAGGGATGGTAAAGGAAGACATTGATCTTGAAGTATTGCCAGGAATTACCCAACACAAGAAGAATCATCTTCGTCTTTGTGCCAAGACTAGGACCAATATATAA 1512 0.4087 MLSTLFLPVVLCLIFPVLFLFFINSLRTFKNSPCPPGPQGLPIIGNLHQLDNSILYLQLWQLSKKYGPIFSLQFGLRPAIVISSPKLAKEILKIHDLVFSGRPKLCGQQKLSYNGSEIAFSSYNEYWREIRKICVVHIFSSKRVSTFSSIRKFEVQQMIKRISGHASSAGVTNLSELLLSFSSTVMCRLAFGRRYEEEGSEKSRFHELLKELQAMMGSFFISDYIPFMGWVDKLRGLHARLDRNFKDFDRFYQDVIEEHMDPNRERADQQDMVDVLLQLKNDRSLSIDITFDHIKGVLMNILAAGTDTTAATLVWTMTALVRNPRVMKKVQEEIRNLGGKKYFLDEDDIQKLSYLKAVIKEALRLYPPGPLLVPRESNEDCIISGYRVPAKAIVIVNAWVIHRDPEAWKNPEEFYPERFLDCAIDFHGQDFELIPFGSGRRICPGIAMAVVTLELVLANLLRSFDWELPQGMVKEDIDLEVLPGITQHKKNHLRLCAKTRTNI 503
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g01066 503 CDD CYP71-like 65 493 - -
Spst4g01066 503 PRINTS E-class P450 group I signature 356 374 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst4g01066 503 PRINTS E-class P450 group I signature 397 421 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst4g01066 503 PRINTS E-class P450 group I signature 443 466 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst4g01066 503 PRINTS E-class P450 group I signature 433 443 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst4g01066 503 PRINTS E-class P450 group I signature 87 108 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst4g01066 503 PRINTS E-class P450 group I signature 293 310 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst4g01066 503 PRINTS E-class P450 group I signature 313 339 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst4g01066 503 PRINTS E-class P450 group I signature 63 82 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst4g01066 503 PRINTS E-class P450 group I signature 181 199 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst4g01066 503 PRINTS P450 superfamily signature 304 321 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst4g01066 503 PRINTS P450 superfamily signature 434 443 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst4g01066 503 PRINTS P450 superfamily signature 357 368 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst4g01066 503 PRINTS P450 superfamily signature 443 454 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst4g01066 503 Gene3D Cytochrome P450 28 502 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst4g01066 503 SUPERFAMILY Cytochrome P450 35 500 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst4g01066 503 Pfam Cytochrome P450 35 491 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst4g01066 503 FunFam Cytochrome P450 83B1 21 496 - -
Spst4g01066 503 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 436 445 IPR017972 GO:0005506|GO:0016705
Spst4g01066 503 PANTHER CYTOCHROME P450 71B11-RELATED 19 497 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g01066 Spst-Chr4 43304757 43307612 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst4g01066 20 496 Cytochrome P450 AT4G31500 48.542 4.80e-172 493
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g01066 - - gmx:100787727 840.491